Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TSPY12P-201ENST00000421279 868 ntBASIC6.25□□□□□ -1.41
HMCN1Q96RW7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMCN1Q96RW7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AC083849.1-201ENST00000615227 514 ntBASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AC004870.1-201ENST00000315132 882 ntBASIC6.24□□□□□ -1.41
HMCN1Q96RW7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 HNRNPA1P28-201ENST00000424481 961 ntBASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 KRT18P38-201ENST00000449496 1282 ntBASIC6.24□□□□□ -1.41
HMCN1Q96RW7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 RER1-204ENST00000378518 522 ntTSL 3 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC6.24□□□□□ -1.41
HMCN1Q96RW7 ABBA01031674.1-201ENST00000635145 728 ntBASIC6.24□□□□□ -1.41
HMCN1Q96RW7 FSCN1P1-201ENST00000568912 1481 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AC092338.2-201ENST00000568827 1415 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TSPY19P-201ENST00000418461 509 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TSPY18P-201ENST00000441642 509 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 AL512604.3-201ENST00000569583 964 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 LINC01960-201ENST00000563759 1884 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 KRT16P1-201ENST00000399124 1418 ntBASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HMCN1Q96RW7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms