Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP6Q96FZ7 AC005082.1-201ENST00000413042 2259 ntBASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP6Q96FZ7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 TMEM179-206ENST00000616017 1645 ntBASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 AC008406.3-201ENST00000620001 1374 ntBASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.29■□□□□ 0.84
CHMP6Q96FZ7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP6Q96FZ7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP6Q96FZ7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP6Q96FZ7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CHMP6Q96FZ7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 Z82202.1-201ENST00000623446 1880 ntBASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMP6Q96FZ7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms