Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 AL390955.1-201ENST00000428694 934 ntBASIC24.91■■□□□ 1.58
CNKSR1Q969H4 SLC25A3P1-201ENST00000443844 931 ntBASIC24.91■■□□□ 1.58
CNKSR1Q969H4 KSR1P1-201ENST00000446298 240 ntBASIC24.91■■□□□ 1.58
CNKSR1Q969H4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 AC011484.1-201ENST00000377652 1995 ntBASIC24.91■■□□□ 1.58
CNKSR1Q969H4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.91■■□□□ 1.58
CNKSR1Q969H4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 CR392000.1-201ENST00000624770 1228 ntBASIC24.9■■□□□ 1.58
CNKSR1Q969H4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.9■■□□□ 1.58
CNKSR1Q969H4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.89■■□□□ 1.58
CNKSR1Q969H4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CNKSR1Q969H4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.89■■□□□ 1.57
CNKSR1Q969H4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CNKSR1Q969H4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.89■■□□□ 1.57
CNKSR1Q969H4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CNKSR1Q969H4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 NIFKP9-201ENST00000419265 221 ntBASIC24.88■■□□□ 1.57
CNKSR1Q969H4 DUX4L26-201ENST00000489078 1255 ntBASIC24.88■■□□□ 1.57
CNKSR1Q969H4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CNKSR1Q969H4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 KRT8P36-201ENST00000489121 1440 ntBASIC24.87■■□□□ 1.57
CNKSR1Q969H4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 NTF6B-201ENST00000591913 560 ntBASIC24.87■■□□□ 1.57
CNKSR1Q969H4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CNKSR1Q969H4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 AC104076.2-201ENST00000448912 469 ntBASIC24.86■■□□□ 1.57
CNKSR1Q969H4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 KRT16P1-201ENST00000399124 1418 ntBASIC24.86■■□□□ 1.57
CNKSR1Q969H4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.86■■□□□ 1.57
CNKSR1Q969H4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.85■■□□□ 1.57
CNKSR1Q969H4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms