Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 AC092667.1-201ENST00000434301 2586 ntBASIC19.93■□□□□ 0.78
USP7Q93009 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
USP7Q93009 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.93■□□□□ 0.78
USP7Q93009 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP7Q93009 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP7Q93009 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.93■□□□□ 0.78
USP7Q93009 AC006058.3-201ENST00000606217 1069 ntBASIC19.93■□□□□ 0.78
USP7Q93009 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP7Q93009 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP7Q93009 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.93■□□□□ 0.78
USP7Q93009 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP7Q93009 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.92■□□□□ 0.78
USP7Q93009 LSM12P1-201ENST00000411836 588 ntBASIC19.92■□□□□ 0.78
USP7Q93009 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.92■□□□□ 0.78
USP7Q93009 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.92■□□□□ 0.78
USP7Q93009 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP7Q93009 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.92■□□□□ 0.78
USP7Q93009 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 AP006294.2-201ENST00000641667 209 ntBASIC19.92■□□□□ 0.78
USP7Q93009 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.92■□□□□ 0.78
USP7Q93009 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
USP7Q93009 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP7Q93009 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
USP7Q93009 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
USP7Q93009 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.92■□□□□ 0.78
USP7Q93009 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.92■□□□□ 0.78
USP7Q93009 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP7Q93009 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 AC027702.1-201ENST00000563810 1770 ntBASIC19.91■□□□□ 0.78
USP7Q93009 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
USP7Q93009 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
USP7Q93009 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
USP7Q93009 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.91■□□□□ 0.78
USP7Q93009 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP7Q93009 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP7Q93009 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
USP7Q93009 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
USP7Q93009 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP7Q93009 SLC25A24-204ENST00000569674 2357 ntBASIC19.9■□□□□ 0.78
USP7Q93009 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.9■□□□□ 0.78
USP7Q93009 GCSHP5-201ENST00000443090 522 ntBASIC19.9■□□□□ 0.78
USP7Q93009 AL158047.1-201ENST00000445918 881 ntBASIC19.9■□□□□ 0.78
USP7Q93009 AC128676.1-201ENST00000454392 318 ntBASIC19.9■□□□□ 0.78
USP7Q93009 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.9■□□□□ 0.78
USP7Q93009 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.9■□□□□ 0.78
USP7Q93009 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.9■□□□□ 0.78
USP7Q93009 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.9■□□□□ 0.78
USP7Q93009 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.9■□□□□ 0.78
USP7Q93009 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP7Q93009 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP7Q93009 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.89■□□□□ 0.78
USP7Q93009 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
USP7Q93009 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP7Q93009 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms