Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 AC112907.3-201ENST00000577781 2400 ntBASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 TSPY26P-202ENST00000565928 3884 ntBASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 AL022069.1-201ENST00000568025 1636 ntBASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SPTSSBQ8NFR3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 MIR3960-201ENST00000583311 91 ntBASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 AC097358.2-201ENST00000607541 1159 ntBASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 AC244015.2-201ENST00000616358 1861 ntBASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SPTSSBQ8NFR3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 AL391005.1-201ENST00000623953 2435 ntBASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms