Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX4O95219 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX4O95219 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX4O95219 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX4O95219 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX4O95219 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX4O95219 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SNX4O95219 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX4O95219 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.92■□□□□ 0.62
SNX4O95219 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.92■□□□□ 0.62
SNX4O95219 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.92■□□□□ 0.62
SNX4O95219 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.92■□□□□ 0.62
SNX4O95219 SLC29A4P1-201ENST00000398760 971 ntBASIC18.92■□□□□ 0.62
SNX4O95219 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNX4O95219 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX4O95219 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX4O95219 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX4O95219 AL020996.1-203ENST00000536896 2307 ntBASIC18.91■□□□□ 0.62
SNX4O95219 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SNX4O95219 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNX4O95219 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX4O95219 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.91■□□□□ 0.62
SNX4O95219 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SNX4O95219 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX4O95219 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNX4O95219 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX4O95219 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SNX4O95219 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 AC007322.3-201ENST00000426526 701 ntBASIC18.9■□□□□ 0.62
SNX4O95219 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNX4O95219 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX4O95219 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX4O95219 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
SNX4O95219 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX4O95219 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 AC116050.2-201ENST00000612102 1779 ntBASIC18.89■□□□□ 0.61
SNX4O95219 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.89■□□□□ 0.61
SNX4O95219 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 AC016405.3-201ENST00000607710 860 ntBASIC18.89■□□□□ 0.61
SNX4O95219 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX4O95219 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX4O95219 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNX4O95219 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX4O95219 MKRN4P-201ENST00000444706 1521 ntBASIC18.89■□□□□ 0.61
SNX4O95219 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX4O95219 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SNX4O95219 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX4O95219 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 AC100791.3-201ENST00000617619 330 ntBASIC18.88■□□□□ 0.61
SNX4O95219 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SNX4O95219 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX4O95219 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX4O95219 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX4O95219 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX4O95219 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms