Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 AC117947.1-201ENST00000427448 529 ntBASIC19.47■□□□□ 0.71
CNOT1A5YKK6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 KRT16P1-201ENST00000399124 1418 ntBASIC19.46■□□□□ 0.71
CNOT1A5YKK6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 FAM87A-204ENST00000613235 858 ntBASIC19.46■□□□□ 0.71
CNOT1A5YKK6 AL121906.2-201ENST00000621597 723 ntBASIC19.46■□□□□ 0.71
CNOT1A5YKK6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT1A5YKK6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 FAM207BP-201ENST00000447172 505 ntBASIC19.45■□□□□ 0.7
CNOT1A5YKK6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 GPALPP1-207ENST00000611650 899 ntBASIC19.45■□□□□ 0.7
CNOT1A5YKK6 AC023511.2-201ENST00000618803 211 ntBASIC19.45■□□□□ 0.7
CNOT1A5YKK6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT1A5YKK6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.44■□□□□ 0.7
CNOT1A5YKK6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT1A5YKK6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 AL031985.4-201ENST00000642138 673 ntBASIC19.43■□□□□ 0.7
CNOT1A5YKK6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 AIRN-201ENST00000601203 4374 ntBASIC19.43■□□□□ 0.7
CNOT1A5YKK6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT1A5YKK6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 AL121956.5-201ENST00000625261 221 ntBASIC19.42■□□□□ 0.7
CNOT1A5YKK6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT1A5YKK6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms