Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.469e-7■■□□□ 13.1
PRPF8Q6P2Q9 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 510.49□□□□□ -0.739e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-211ENST00000573699 864 ntTSL 317.35■□□□□ 0.371e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-213ENST00000574841 510 ntTSL 216.93■□□□□ 0.31e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-215ENST00000576496 937 ntAPPRIS ALT2 TSL 1 (best)16.03■□□□□ 0.161e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.141e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.161e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-205ENST00000570322 1083 ntTSL 313.96□□□□□ -0.181e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.92□□□□□ -0.181e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.98□□□□□ -0.331e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-209ENST00000573513 827 ntTSL 512.38□□□□□ -0.431e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.491e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-212ENST00000574255 671 ntTSL 2 BASIC11.83□□□□□ -0.511e-7■■□□□ 13.1
PRPF8Q6P2Q9 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC10.54□□□□□ -0.721e-7■■□□□ 13.1
PRPF8Q6P2Q9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.034e-8■■□□□ 13.1
PRPF8Q6P2Q9 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.624e-8■■□□□ 13.1
PRPF8Q6P2Q9 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.924e-8■■□□□ 13.1
PRPF8Q6P2Q9 COBLL1-204ENST00000409184 4636 ntAPPRIS ALT2 TSL 1 (best)8.25□□□□□ -1.094e-8■■□□□ 13.1
PRPF8Q6P2Q9 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.314e-8■■□□□ 13.1
PRPF8Q6P2Q9 ARHGEF10L-209ENST00000495593 2261 ntTSL 211.75□□□□□ -0.531e-10■■□□□ 13.1
PRPF8Q6P2Q9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.243e-9■■□□□ 13.1
PRPF8Q6P2Q9 FKBP2-206ENST00000541388 705 ntTSL 516.49■□□□□ 0.233e-9■■□□□ 13.1
PRPF8Q6P2Q9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.193e-9■■□□□ 13.1
PRPF8Q6P2Q9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.443e-9■■□□□ 13.1
PRPF8Q6P2Q9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.01■□□□□ 0.634e-8■■□□□ 13.1
PRPF8Q6P2Q9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.414e-8■■□□□ 13.1
PRPF8Q6P2Q9 TAF4-205ENST00000488539 645 ntTSL 511.25□□□□□ -0.616e-9■■□□□ 13.1
PRPF8Q6P2Q9 SERPINA3-206ENST00000555820 981 ntTSL 58.75□□□□□ -1.013e-17■■□□□ 13.1
PRPF8Q6P2Q9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.399e-8■■□□□ 13.1
PRPF8Q6P2Q9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.42□□□□□ -0.429e-8■■□□□ 13.1
PRPF8Q6P2Q9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.549e-8■■□□□ 13.1
PRPF8Q6P2Q9 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.21□□□□□ -0.629e-8■■□□□ 13.1
PRPF8Q6P2Q9 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC10.62□□□□□ -0.719e-8■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)19.81■□□□□ 0.762e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)19.41■□□□□ 0.72e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-209ENST00000489262 2780 ntTSL 215.86■□□□□ 0.132e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-210ENST00000493197 1969 ntTSL 215.41■□□□□ 0.062e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-216ENST00000510991 814 ntTSL 39.9□□□□□ -0.822e-20■■□□□ 13.1
PRPF8Q6P2Q9 PHYKPL-208ENST00000481811 2709 ntTSL 29.49□□□□□ -0.892e-20■■□□□ 13.1
PRPF8Q6P2Q9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.912e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNF513-203ENST00000436006 510 ntTSL 216.89■□□□□ 0.292e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNF513-204ENST00000491924 566 ntTSL 516.03■□□□□ 0.162e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.97■□□□□ 0.152e-11■■□□□ 13.1
PRPF8Q6P2Q9 RBM10-204ENST00000478410 847 ntTSL 513.01□□□□□ -0.331e-6■■□□□ 13.1
PRPF8Q6P2Q9 SLC38A10-204ENST00000539748 528 ntTSL 312.18□□□□□ -0.469e-10■■□□□ 13.1
PRPF8Q6P2Q9 SQSTM1-205ENST00000464493 532 ntTSL 412.18□□□□□ -0.464e-19■■□□□ 13.1
PRPF8Q6P2Q9 TPM4-205ENST00000586833 558 ntTSL 511.59□□□□□ -0.551e-6■■□□□ 13.1
PRPF8Q6P2Q9 TPM4-215ENST00000592138 635 ntTSL 28.04□□□□□ -1.121e-6■■□□□ 13.1
PRPF8Q6P2Q9 TPM4-210ENST00000588507 367 ntTSL 37.13□□□□□ -1.271e-6■■□□□ 13.1
PRPF8Q6P2Q9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.49e-9■■□□□ 13.1
PRPF8Q6P2Q9 SCAF1-204ENST00000601038 491 ntAPPRIS ALT2 TSL 314.67□□□□□ -0.065e-8■■□□□ 13.1
PRPF8Q6P2Q9 SCAF1-203ENST00000598359 662 ntAPPRIS ALT2 TSL 311.71□□□□□ -0.535e-8■■□□□ 13.1
PRPF8Q6P2Q9 SCAF1-202ENST00000595242 463 ntAPPRIS ALT2 TSL 311.65□□□□□ -0.545e-8■■□□□ 13.1
PRPF8Q6P2Q9 CASP9-208ENST00000469637 725 ntTSL 311.89□□□□□ -0.513e-6■■□□□ 13.1
PRPF8Q6P2Q9 SCMH1-215ENST00000488592 363 ntTSL 211.02□□□□□ -0.652e-7■■□□□ 13.1
PRPF8Q6P2Q9 PCNX3-203ENST00000530174 1229 ntTSL 1 (best)16.08■□□□□ 0.175e-6■■□□□ 13.1
PRPF8Q6P2Q9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.097e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-206ENST00000507899 741 ntTSL 513.92□□□□□ -0.187e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-213ENST00000515679 591 ntTSL 313.92□□□□□ -0.187e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-208ENST00000510802 532 ntTSL 513.18□□□□□ -0.37e-6■■□□□ 13.1
PRPF8Q6P2Q9 SYNJ2BP-COX16-204ENST00000618385 656 ntTSL 311.78□□□□□ -0.527e-6■■□□□ 13.1
PRPF8Q6P2Q9 CLSTN3-206ENST00000535668 566 ntTSL 310□□□□□ -0.817e-6■■□□□ 13.1
PRPF8Q6P2Q9 MYH10-209ENST00000476737 592 ntTSL 59.98□□□□□ -0.817e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-204ENST00000504837 679 ntTSL 37.46□□□□□ -1.227e-6■■□□□ 13.1
PRPF8Q6P2Q9 BANP-212ENST00000459966 627 ntTSL 27.43□□□□□ -1.227e-6■■□□□ 13.1
PRPF8Q6P2Q9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.717e-6■■□□□ 13.1
PRPF8Q6P2Q9 SYNJ2BP-202ENST00000554216 902 ntTSL 1 (best)2.85□□□□□ -1.957e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-207ENST00000509314 596 ntTSL 41.04□□□□□ -2.247e-6■■□□□ 13.1
PRPF8Q6P2Q9 FBXL5-203ENST00000503196 595 ntTSL 4-0.63□□□□□ -2.517e-6■■□□□ 13.1
PRPF8Q6P2Q9 HDAC10-212ENST00000477814 1784 ntTSL 216.28■□□□□ 0.29e-8■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.37■□□□□ 0.694e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.694e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.81■□□□□ 0.444e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.234e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-209ENST00000568511 485 ntTSL 47.86□□□□□ -1.154e-11■■□□□ 13.1
PRPF8Q6P2Q9 ZNRF1-203ENST00000564320 607 ntTSL 37.65□□□□□ -1.184e-11■■□□□ 13.1
PRPF8Q6P2Q9 WNK2-214ENST00000474009 561 ntTSL 315.06■□□□□ 03e-9■■□□□ 13.1
PRPF8Q6P2Q9 WNK2-216ENST00000479696 532 ntTSL 36.84□□□□□ -1.313e-9■■□□□ 13.1
PRPF8Q6P2Q9 SEC24D-210ENST00000511033 576 ntTSL 44.11□□□□□ -1.756e-6■■□□□ 13.1
PRPF8Q6P2Q9 IMPDH1-213ENST00000491376 748 ntTSL 416.77■□□□□ 0.289e-7■■□□□ 13.1
PRPF8Q6P2Q9 IMPDH1-215ENST00000496487 544 ntTSL 416.4■□□□□ 0.229e-7■■□□□ 13.1
PRPF8Q6P2Q9 IMPDH1-212ENST00000489263 598 ntTSL 312.91□□□□□ -0.349e-7■■□□□ 13.1
PRPF8Q6P2Q9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.77■■□□□ 1.241e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-206ENST00000596687 800 ntTSL 521.39■■□□□ 1.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.821e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-207ENST00000599044 849 ntTSL 219.77■□□□□ 0.761e-8■■□□□ 13.1
PRPF8Q6P2Q9 NCOR1-206ENST00000411510 1883 ntTSL 1 (best)18.32■□□□□ 0.525e-6■■□□□ 13.1
PRPF8Q6P2Q9 NCOR1-211ENST00000460276 1848 ntTSL 218.27■□□□□ 0.525e-6■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-205ENST00000596161 574 ntTSL 416.69■□□□□ 0.261e-8■■□□□ 13.1
PRPF8Q6P2Q9 TMC7-204ENST00000568469 1617 ntTSL 216.35■□□□□ 0.211e-8■■□□□ 13.1
PRPF8Q6P2Q9 MYO19-223ENST00000620869 574 ntTSL 416.27■□□□□ 0.191e-8■■□□□ 13.1
PRPF8Q6P2Q9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.07■□□□□ 0.161e-8■■□□□ 13.1
PRPF8Q6P2Q9 NCOR1-221ENST00000582357 1877 ntTSL 1 (best)16.02■□□□□ 0.155e-6■■□□□ 13.1
PRPF8Q6P2Q9 ITGB5-207ENST00000481591 1202 ntTSL 515.67■□□□□ 0.11e-8■■□□□ 13.1
PRPF8Q6P2Q9 TOMM22-202ENST00000492561 782 ntTSL 215.51■□□□□ 0.071e-8■■□□□ 13.1
PRPF8Q6P2Q9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.051e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-208ENST00000521345 592 ntTSL 415.17■□□□□ 0.021e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 ARMC6-214ENST00000540707 557 ntTSL 415.01□□□□□ -0.011e-8■■□□□ 13.1
Retrieved 100 of 73,762 protein–RNA pairs in 1021.4 ms