Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN4Q9Y3Q4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.83■□□□□ 0.93
HCN4Q9Y3Q4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN4Q9Y3Q4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.83■□□□□ 0.92
HCN4Q9Y3Q4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.83■□□□□ 0.92
HCN4Q9Y3Q4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCN4Q9Y3Q4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 FITM1-202ENST00000559294 800 ntBASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 AC073195.1-201ENST00000607241 877 ntBASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 AP006587.3-201ENST00000525742 1516 ntBASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN4Q9Y3Q4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AL390955.1-201ENST00000428694 934 ntBASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN4Q9Y3Q4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 AC004263.2-201ENST00000617183 678 ntBASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
HCN4Q9Y3Q4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 AC079089.2-201ENST00000531211 1277 ntBASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN4Q9Y3Q4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 AC127496.7-201ENST00000625110 1798 ntBASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms