Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM54Q969K7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TMEM54Q969K7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 AC083906.2-201ENST00000511578 360 ntBASIC17.88■□□□□ 0.45
TMEM54Q969K7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM54Q969K7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM54Q969K7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 NCF1B-203ENST00000435988 1254 ntBASIC17.87■□□□□ 0.45
TMEM54Q969K7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 SMG8-203ENST00000578922 2178 ntBASIC17.87■□□□□ 0.45
TMEM54Q969K7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM54Q969K7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TMEM54Q969K7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 LSM12P1-201ENST00000411836 588 ntBASIC17.86■□□□□ 0.45
TMEM54Q969K7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM54Q969K7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM54Q969K7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM54Q969K7 BX276092.2-201ENST00000417668 665 ntBASIC17.85■□□□□ 0.45
TMEM54Q969K7 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.85■□□□□ 0.45
TMEM54Q969K7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM54Q969K7 C2orf69P4-201ENST00000565394 541 ntBASIC17.85■□□□□ 0.45
TMEM54Q969K7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM54Q969K7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.85■□□□□ 0.45
TMEM54Q969K7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM54Q969K7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 GPX1P1-201ENST00000388829 606 ntBASIC17.84■□□□□ 0.45
TMEM54Q969K7 GUSBP6-202ENST00000438529 1198 ntBASIC17.84■□□□□ 0.45
TMEM54Q969K7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.84■□□□□ 0.45
TMEM54Q969K7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.84■□□□□ 0.45
TMEM54Q969K7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM54Q969K7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM54Q969K7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms