Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC1Q92922 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC1Q92922 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC1Q92922 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 REXO1L10P-201ENST00000615707 1290 ntBASIC26.08■■□□□ 1.77
SMARCC1Q92922 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
SMARCC1Q92922 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC1Q92922 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC1Q92922 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.08■■□□□ 1.76
SMARCC1Q92922 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SMARCC1Q92922 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 KRT8P9-201ENST00000558927 1449 ntBASIC26.07■■□□□ 1.76
SMARCC1Q92922 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC1Q92922 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC1Q92922 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 AP002982.1-201ENST00000492365 877 ntBASIC26.07■■□□□ 1.76
SMARCC1Q92922 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 AC011484.1-201ENST00000377652 1995 ntBASIC26.07■■□□□ 1.76
SMARCC1Q92922 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SMARCC1Q92922 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 AC005521.1-201ENST00000393351 872 ntBASIC26.06■■□□□ 1.76
SMARCC1Q92922 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 AP000525.1-201ENST00000608286 694 ntBASIC26.06■■□□□ 1.76
SMARCC1Q92922 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.06■■□□□ 1.76
SMARCC1Q92922 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC1Q92922 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 AL031963.3-201ENST00000606441 850 ntBASIC26.05■■□□□ 1.76
SMARCC1Q92922 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
SMARCC1Q92922 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC1Q92922 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC26.04■■□□□ 1.76
SMARCC1Q92922 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 AC242852.2-201ENST00000615738 1807 ntBASIC26.04■■□□□ 1.76
SMARCC1Q92922 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC1Q92922 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SMARCC1Q92922 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
SMARCC1Q92922 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.03■■□□□ 1.76
SMARCC1Q92922 MIR1238-201ENST00000408483 83 ntBASIC26.03■■□□□ 1.76
SMARCC1Q92922 AC113347.1-201ENST00000413321 391 ntBASIC26.03■■□□□ 1.76
SMARCC1Q92922 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.03■■□□□ 1.76
SMARCC1Q92922 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.03■■□□□ 1.76
SMARCC1Q92922 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 LINC01568-207ENST00000641790 1380 ntBASIC26.03■■□□□ 1.76
SMARCC1Q92922 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 KRT8P36-201ENST00000489121 1440 ntBASIC26.03■■□□□ 1.76
SMARCC1Q92922 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC1Q92922 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.02■■□□□ 1.76
SMARCC1Q92922 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC1Q92922 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC1Q92922 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC1Q92922 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC1Q92922 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.02■■□□□ 1.76
SMARCC1Q92922 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC1Q92922 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms