Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
LCA10Q71F78 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LCA10Q71F78 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC10.9□□□□□ -0.66
LCA10Q71F78 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LCA10Q71F78 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC10.9□□□□□ -0.67
LCA10Q71F78 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.67
LCA10Q71F78 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LCA10Q71F78 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 FEM1AP4-201ENST00000443167 1987 ntBASIC10.89□□□□□ -0.67
LCA10Q71F78 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC10.89□□□□□ -0.67
LCA10Q71F78 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 MIR4508-201ENST00000584178 70 ntBASIC10.89□□□□□ -0.67
LCA10Q71F78 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC10.89□□□□□ -0.67
LCA10Q71F78 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC10.89□□□□□ -0.67
LCA10Q71F78 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.89□□□□□ -0.67
LCA10Q71F78 LINC01529-204ENST00000636474 1715 ntBASIC10.89□□□□□ -0.67
LCA10Q71F78 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LCA10Q71F78 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 AC018470.1-201ENST00000624790 3129 ntBASIC10.89□□□□□ -0.67
LCA10Q71F78 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC10.89□□□□□ -0.67
LCA10Q71F78 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LCA10Q71F78 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.88□□□□□ -0.67
LCA10Q71F78 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 AC093503.3-201ENST00000624917 2352 ntBASIC10.88□□□□□ -0.67
LCA10Q71F78 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 GUK1-208ENST00000366728 842 ntTSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 PRORSD1P-202ENST00000563365 2154 ntBASIC10.88□□□□□ -0.67
LCA10Q71F78 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LCA10Q71F78 AC244015.2-201ENST00000616358 1861 ntBASIC10.88□□□□□ -0.67
LCA10Q71F78 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC10.88□□□□□ -0.67
LCA10Q71F78 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LCA10Q71F78 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LCA10Q71F78 AC124067.4-201ENST00000519691 2379 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms