Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 AL355472.2-201ENST00000422958 438 ntBASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 DPP3P2-201ENST00000416030 1696 ntBASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.48■□□□□ 0.39
COLCA1Q6ZS62 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 MIR663A-201ENST00000385250 93 ntBASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 AF201337.1-201ENST00000520239 748 ntBASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 AL589743.5-201ENST00000616611 1050 ntBASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 SMG8-203ENST00000578922 2178 ntBASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 AC099778.1-201ENST00000568593 1911 ntBASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
COLCA1Q6ZS62 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 KRT17P1-201ENST00000399211 1546 ntBASIC17.46■□□□□ 0.39
COLCA1Q6ZS62 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COLCA1Q6ZS62 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
COLCA1Q6ZS62 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COLCA1Q6ZS62 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 AC105036.2-201ENST00000569468 176 ntBASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 AC092666.2-201ENST00000613287 246 ntBASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 PTBP1P-201ENST00000554374 1601 ntBASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
COLCA1Q6ZS62 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms