Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC144NLQ6NUI1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 MIPEPP3-201ENST00000412105 444 ntBASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 AC104771.1-201ENST00000603335 964 ntBASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 AC092118.2-201ENST00000613495 667 ntBASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC144NLQ6NUI1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 AL355472.2-201ENST00000422958 438 ntBASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC144NLQ6NUI1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 HLA-L-209ENST00000420110 1011 ntBASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 AL138781.1-201ENST00000566567 1274 ntBASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC144NLQ6NUI1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC144NLQ6NUI1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 GUSBP6-202ENST00000438529 1198 ntBASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 AC133041.1-202ENST00000642053 222 ntBASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC144NLQ6NUI1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC144NLQ6NUI1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC144NLQ6NUI1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC144NLQ6NUI1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms