Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 PCYT2-214ENST00000573636 913 ntTSL 520.73■□□□□ 0.911e-7■■□□□ 14.2
LSM11P83369 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.893e-10■■□□□ 14.2
LSM11P83369 HNRNPM-209ENST00000597813 630 ntTSL 217.78■□□□□ 0.443e-10■■□□□ 14.2
LSM11P83369 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.413e-10■■□□□ 14.2
LSM11P83369 HNRNPM-214ENST00000600806 2373 ntTSL 516.92■□□□□ 0.33e-10■■□□□ 14.2
LSM11P83369 HNRNPM-204ENST00000594907 1078 ntTSL 516.59■□□□□ 0.253e-10■■□□□ 14.2
LSM11P83369 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.213e-10■■□□□ 14.2
LSM11P83369 HNRNPM-206ENST00000596984 664 ntTSL 516.13■□□□□ 0.173e-10■■□□□ 14.2
LSM11P83369 HNRNPM-213ENST00000600092 1086 ntTSL 216.13■□□□□ 0.173e-10■■□□□ 14.2
LSM11P83369 HNRNPM-215ENST00000601645 832 ntTSL 312.81□□□□□ -0.363e-10■■□□□ 14.2
LSM11P83369 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-7■■□□□ 14.2
LSM11P83369 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC10.99□□□□□ -0.654e-7■■□□□ 14.2
LSM11P83369 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC10.49□□□□□ -0.734e-7■■□□□ 14.2
LSM11P83369 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.884e-7■■□□□ 14.2
LSM11P83369 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.31□□□□□ -0.924e-7■■□□□ 14.2
LSM11P83369 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.944e-7■■□□□ 14.2
LSM11P83369 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.09□□□□□ -1.114e-7■■□□□ 14.2
LSM11P83369 OGDH-202ENST00000419661 789 ntTSL 57.45□□□□□ -1.224e-7■■□□□ 14.2
LSM11P83369 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.083e-6■■□□□ 14.2
LSM11P83369 MTG1-203ENST00000460848 2730 ntTSL 213.4□□□□□ -0.261e-6■■□□□ 14.2
LSM11P83369 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.414e-11■■□□□ 14.2
LSM11P83369 AUP1-204ENST00000463900 1645 ntTSL 1 (best)15.46■□□□□ 0.064e-11■■□□□ 14.2
LSM11P83369 AUP1-202ENST00000425118 1581 ntTSL 1 (best)15.12■□□□□ 0.014e-11■■□□□ 14.2
LSM11P83369 AUP1-206ENST00000466894 1658 ntTSL 514.67□□□□□ -0.064e-11■■□□□ 14.2
LSM11P83369 NBEAL2-209ENST00000476095 959 ntTSL 513.84□□□□□ -0.196e-7■■□□□ 14.2
LSM11P83369 AUP1-208ENST00000486234 984 ntTSL 511.58□□□□□ -0.564e-11■■□□□ 14.2
LSM11P83369 GSDMB-207ENST00000468820 369 ntTSL 510.27□□□□□ -0.773e-11■■□□□ 14.2
LSM11P83369 GSDMB-211ENST00000519429 616 ntTSL 58.87□□□□□ -0.993e-11■■□□□ 14.2
LSM11P83369 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)17.71■□□□□ 0.431e-6■■□□□ 14.1
LSM11P83369 ISYNA1-205ENST00000578352 592 ntTSL 216.31■□□□□ 0.21e-6■■□□□ 14.1
LSM11P83369 ISYNA1-208ENST00000581800 627 ntTSL 413.79□□□□□ -0.21e-6■■□□□ 14.1
LSM11P83369 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.654e-8■■□□□ 14.1
LSM11P83369 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.334e-8■■□□□ 14.1
LSM11P83369 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.45■□□□□ 0.064e-8■■□□□ 14.1
LSM11P83369 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.054e-8■■□□□ 14.1
LSM11P83369 RAB5A-202ENST00000412966 622 ntTSL 312.02□□□□□ -0.494e-8■■□□□ 14.1
LSM11P83369 RAB5A-206ENST00000469122 918 ntTSL 211.5□□□□□ -0.574e-8■■□□□ 14.1
LSM11P83369 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC10.8□□□□□ -0.684e-8■■□□□ 14.1
LSM11P83369 RAB5A-205ENST00000446547 1358 ntTSL 1 (best)10.31□□□□□ -0.764e-8■■□□□ 14.1
LSM11P83369 TRIM33-203ENST00000448034 2706 ntTSL 56.3□□□□□ -1.44e-8■■□□□ 14.1
LSM11P83369 PHKA2-206ENST00000473739 751 ntTSL 312.42□□□□□ -0.425e-8■■□□□ 14.1
LSM11P83369 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.256e-8■■□□□ 14.1
LSM11P83369 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.14□□□□□ -0.476e-8■■□□□ 14.1
LSM11P83369 WDR4-207ENST00000492742 2205 ntTSL 218.87■□□□□ 0.617e-6■■□□□ 14.1
LSM11P83369 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.569e-7■■□□□ 14.1
LSM11P83369 UBXN11-213ENST00000472155 2646 ntTSL 1 (best)14.28□□□□□ -0.129e-7■■□□□ 14.1
LSM11P83369 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.139e-7■■□□□ 14.1
LSM11P83369 UBXN11-216ENST00000496466 2339 ntTSL 214.06□□□□□ -0.169e-7■■□□□ 14.1
LSM11P83369 UBXN11-215ENST00000494942 2325 ntTSL 213.98□□□□□ -0.179e-7■■□□□ 14.1
LSM11P83369 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.29e-7■■□□□ 14.1
LSM11P83369 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.219e-7■■□□□ 14.1
LSM11P83369 UBXN11-214ENST00000475591 2542 ntTSL 1 (best)13.33□□□□□ -0.289e-7■■□□□ 14.1
LSM11P83369 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.299e-7■■□□□ 14.1
LSM11P83369 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.32□□□□□ -0.449e-7■■□□□ 14.1
LSM11P83369 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.767e-9■■□□□ 14.1
LSM11P83369 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.075e-7■■□□□ 14.1
LSM11P83369 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.395e-7■■□□□ 14.1
LSM11P83369 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.38■□□□□ 0.691e-32■■□□□ 14.1
LSM11P83369 SRRM2-218ENST00000574331 1759 ntTSL 216.26■□□□□ 0.191e-32■■□□□ 14.1
LSM11P83369 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.071e-32■■□□□ 14.1
LSM11P83369 STARD10-210ENST00000537947 1100 ntTSL 322.71■■□□□ 1.232e-7■■□□□ 14.1
LSM11P83369 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.14■■□□□ 1.132e-7■■□□□ 14.1
LSM11P83369 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.562e-7■■□□□ 14.1
LSM11P83369 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.16■□□□□ 0.52e-7■■□□□ 14.1
LSM11P83369 STARD10-212ENST00000538437 747 ntTSL 217.3■□□□□ 0.362e-7■■□□□ 14.1
LSM11P83369 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-7■■□□□ 14.1
LSM11P83369 STARD10-217ENST00000543089 506 ntTSL 1 (best)15.32■□□□□ 0.042e-7■■□□□ 14.1
LSM11P83369 STARD10-204ENST00000535075 526 ntTSL 214.69□□□□□ -0.062e-7■■□□□ 14.1
LSM11P83369 STARD10-219ENST00000544767 509 ntTSL 313.92□□□□□ -0.182e-7■■□□□ 14.1
LSM11P83369 STARD10-209ENST00000537351 426 ntTSL 311.43□□□□□ -0.582e-7■■□□□ 14.1
LSM11P83369 STARD10-208ENST00000536728 451 ntTSL 55.59□□□□□ -1.512e-7■■□□□ 14.1
LSM11P83369 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.42■□□□□ 0.863e-28■■□□□ 14.1
LSM11P83369 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.463e-28■■□□□ 14.1
LSM11P83369 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.31□□□□□ -0.63e-28■■□□□ 14.1
LSM11P83369 BRWD1-212ENST00000470108 1176 ntTSL 37.73□□□□□ -1.173e-28■■□□□ 14.1
LSM11P83369 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.36□□□□□ -1.393e-28■■□□□ 14.1
LSM11P83369 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.59■■□□□ 1.056e-6■■□□□ 14.1
LSM11P83369 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.386e-6■■□□□ 14.1
LSM11P83369 ACSF2-213ENST00000507792 716 ntTSL 213.81□□□□□ -0.26e-6■■□□□ 14.1
LSM11P83369 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.51□□□□□ -0.256e-6■■□□□ 14.1
LSM11P83369 ACSF2-210ENST00000506085 864 ntTSL 1 (best)10.25□□□□□ -0.776e-6■■□□□ 14.1
LSM11P83369 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.58□□□□□ -1.24e-7■■□□□ 14.1
LSM11P83369 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.6■□□□□ 0.899e-10■■□□□ 14.1
LSM11P83369 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.43■□□□□ 0.389e-10■■□□□ 14.1
LSM11P83369 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.359e-10■■□□□ 14.1
LSM11P83369 POLE-217ENST00000541627 2105 ntTSL 216.69■□□□□ 0.269e-10■■□□□ 14.1
LSM11P83369 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.67■□□□□ 0.19e-10■■□□□ 14.1
LSM11P83369 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.37■□□□□ 0.059e-10■■□□□ 14.1
LSM11P83369 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.58□□□□□ -0.089e-10■■□□□ 14.1
LSM11P83369 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.01□□□□□ -0.179e-10■■□□□ 14.1
LSM11P83369 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.199e-10■■□□□ 14.1
LSM11P83369 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC11.55□□□□□ -0.569e-10■■□□□ 14.1
LSM11P83369 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.669e-10■■□□□ 14.1
LSM11P83369 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC10.89□□□□□ -0.679e-10■■□□□ 14.1
LSM11P83369 SEPT8-213ENST00000481030 790 ntTSL 310.48□□□□□ -0.739e-10■■□□□ 14.1
LSM11P83369 ECHDC2-206ENST00000467988 702 ntTSL 517.81■□□□□ 0.444e-6■■□□□ 14.1
LSM11P83369 ECHDC2-215ENST00000487866 940 ntTSL 513.36□□□□□ -0.274e-6■■□□□ 14.1
LSM11P83369 ASL-209ENST00000493708 885 ntTSL 322.09■■□□□ 1.139e-7■■□□□ 14.1
LSM11P83369 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.29■□□□□ 0.689e-7■■□□□ 14.1
LSM11P83369 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.48■□□□□ 0.239e-7■■□□□ 14.1
Retrieved 100 of 11,495 protein–RNA pairs in 78.1 ms