RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
UBXN11-214ENST00000475591 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
UBXN11-214ENST00000475591 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
UBXN11-214ENST00000475591 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
UBXN11-214ENST00000475591 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
UBXN11-214ENST00000475591 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
UBXN11-214ENST00000475591 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
UBXN11-214ENST00000475591 SCRIBQ14160 1630 aa24.07■■□□□ 1.44
UBXN11-214ENST00000475591 ABCC9O60706 1549 aa24.07■■□□□ 1.44
UBXN11-214ENST00000475591 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
UBXN11-214ENST00000475591 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
UBXN11-214ENST00000475591 NACADO15069 1562 aa23.8■■□□□ 1.4
UBXN11-214ENST00000475591 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
UBXN11-214ENST00000475591 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
UBXN11-214ENST00000475591 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
UBXN11-214ENST00000475591 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
UBXN11-214ENST00000475591 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
UBXN11-214ENST00000475591 WIZO95785 1651 aa23.25■■□□□ 1.31
UBXN11-214ENST00000475591 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
UBXN11-214ENST00000475591 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
UBXN11-214ENST00000475591 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-214ENST00000475591 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.279e-7■■■□□ 16.4
UBXN11-214ENST00000475591 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
UBXN11-214ENST00000475591 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
UBXN11-214ENST00000475591 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
UBXN11-214ENST00000475591 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
UBXN11-214ENST00000475591 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
UBXN11-214ENST00000475591 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
UBXN11-214ENST00000475591 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
UBXN11-214ENST00000475591 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
UBXN11-214ENST00000475591 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
UBXN11-214ENST00000475591 HRCP23327 699 aa22.72■■□□□ 1.23
UBXN11-214ENST00000475591 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
UBXN11-214ENST00000475591 TRIM26Q12899 539 aaPredicted RBP22.54■■□□□ 1.2
UBXN11-214ENST00000475591 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.19
UBXN11-214ENST00000475591 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
UBXN11-214ENST00000475591 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
UBXN11-214ENST00000475591 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
UBXN11-214ENST00000475591 SOGA1O94964 1423 aa22.36■■□□□ 1.17
UBXN11-214ENST00000475591 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
UBXN11-214ENST00000475591 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
UBXN11-214ENST00000475591 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
UBXN11-214ENST00000475591 CSRNP3Q8WYN3 585 aa22.16■■□□□ 1.14
UBXN11-214ENST00000475591 EEA1Q15075 1411 aa22.12■■□□□ 1.13
UBXN11-214ENST00000475591 CEP162Q5TB80 1403 aa22.1■■□□□ 1.13
UBXN11-214ENST00000475591 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
UBXN11-214ENST00000475591 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
UBXN11-214ENST00000475591 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
UBXN11-214ENST00000475591 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
UBXN11-214ENST00000475591 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
UBXN11-214ENST00000475591 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
UBXN11-214ENST00000475591 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
UBXN11-214ENST00000475591 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
UBXN11-214ENST00000475591 KIF21BO75037 1637 aa21.87■■□□□ 1.09
UBXN11-214ENST00000475591 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
UBXN11-214ENST00000475591 BIVM-ERCC5R4GMW8 1640 aa21.83■■□□□ 1.09
UBXN11-214ENST00000475591 RAPGEF2Q9Y4G8 1499 aa21.82■■□□□ 1.08
UBXN11-214ENST00000475591 CFTRP13569 1480 aa21.79■■□□□ 1.08
UBXN11-214ENST00000475591 CUX1P39880 1505 aa21.79■■□□□ 1.08
UBXN11-214ENST00000475591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
UBXN11-214ENST00000475591 CLIP1P30622 1438 aa21.75■■□□□ 1.07
UBXN11-214ENST00000475591 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
UBXN11-214ENST00000475591 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
UBXN11-214ENST00000475591 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
UBXN11-214ENST00000475591 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
UBXN11-214ENST00000475591 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
UBXN11-214ENST00000475591 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
UBXN11-214ENST00000475591 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
UBXN11-214ENST00000475591 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
UBXN11-214ENST00000475591 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
UBXN11-214ENST00000475591 CUX2O14529 1486 aa21.46■■□□□ 1.03
UBXN11-214ENST00000475591 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
UBXN11-214ENST00000475591 APLP2Q06481 763 aa21.45■■□□□ 1.02
UBXN11-214ENST00000475591 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
UBXN11-214ENST00000475591 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
UBXN11-214ENST00000475591 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
UBXN11-214ENST00000475591 IGF1RP08069 1367 aa21.39■■□□□ 1.01
UBXN11-214ENST00000475591 NESP48681 1621 aa21.39■■□□□ 1.01
UBXN11-214ENST00000475591 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
UBXN11-214ENST00000475591 KANK4Q5T7N3 995 aaPredicted RBP21.31■■□□□ 1
UBXN11-214ENST00000475591 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
UBXN11-214ENST00000475591 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
UBXN11-214ENST00000475591 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
UBXN11-214ENST00000475591 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
UBXN11-214ENST00000475591 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
UBXN11-214ENST00000475591 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
UBXN11-214ENST00000475591 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
UBXN11-214ENST00000475591 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
UBXN11-214ENST00000475591 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
UBXN11-214ENST00000475591 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
UBXN11-214ENST00000475591 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
UBXN11-214ENST00000475591 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
UBXN11-214ENST00000475591 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
UBXN11-214ENST00000475591 TIAM1Q13009 1591 aa21.01■□□□□ 0.95
UBXN11-214ENST00000475591 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
UBXN11-214ENST00000475591 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
UBXN11-214ENST00000475591 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
UBXN11-214ENST00000475591 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
UBXN11-214ENST00000475591 FHOD3Q2V2M9 1422 aa20.99■□□□□ 0.95
UBXN11-214ENST00000475591 CUL7Q14999 1698 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms