RNA–Protein interactions for RNA: ENST00000541627.2

POLE-217, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 2

Gene POLE, Length 2,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-217ENST00000541627 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
POLE-217ENST00000541627 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
POLE-217ENST00000541627 ZCCHC6Q5VYS8 1495 aaKnown RBP32.19■■■□□ 2.74
POLE-217ENST00000541627 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
POLE-217ENST00000541627 DCAF8L2P0C7V8 631 aa31.48■■■□□ 2.63
POLE-217ENST00000541627 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
POLE-217ENST00000541627 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
POLE-217ENST00000541627 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
POLE-217ENST00000541627 ABCC9O60706 1549 aa30.51■■■□□ 2.47
POLE-217ENST00000541627 SCRIBQ14160 1630 aa30.46■■■□□ 2.47
POLE-217ENST00000541627 NACADO15069 1562 aa30.26■■■□□ 2.43
POLE-217ENST00000541627 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
POLE-217ENST00000541627 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
POLE-217ENST00000541627 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
POLE-217ENST00000541627 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
POLE-217ENST00000541627 MROH2BQ7Z745 1585 aa29.61■■■□□ 2.33
POLE-217ENST00000541627 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
POLE-217ENST00000541627 WIZO95785 1651 aa29.43■■■□□ 2.3
POLE-217ENST00000541627 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
POLE-217ENST00000541627 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
POLE-217ENST00000541627 SMARCA4P51532 1647 aa29.14■■■□□ 2.25
POLE-217ENST00000541627 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
POLE-217ENST00000541627 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
POLE-217ENST00000541627 PABPN1Q86U42 306 aaKnown RBP eCLIP29.05■■■□□ 2.242e-7■■■■■ 30.2
POLE-217ENST00000541627 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
POLE-217ENST00000541627 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
POLE-217ENST00000541627 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
POLE-217ENST00000541627 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
POLE-217ENST00000541627 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
POLE-217ENST00000541627 PCGF6Q9BYE7 350 aa28.69■■■□□ 2.18
POLE-217ENST00000541627 PEG3Q9GZU2 1588 aa28.65■■■□□ 2.18
POLE-217ENST00000541627 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
POLE-217ENST00000541627 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
POLE-217ENST00000541627 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
POLE-217ENST00000541627 HRCP23327 699 aa28.43■■■□□ 2.14
POLE-217ENST00000541627 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
POLE-217ENST00000541627 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
POLE-217ENST00000541627 SOGA1O94964 1423 aa28.22■■■□□ 2.11
POLE-217ENST00000541627 WRNQ14191 1432 aaPredicted RBP eCLIP28.14■■■□□ 2.1
POLE-217ENST00000541627 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
POLE-217ENST00000541627 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
POLE-217ENST00000541627 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
POLE-217ENST00000541627 HMGXB3Q12766 1538 aa27.99■■■□□ 2.07
POLE-217ENST00000541627 EEA1Q15075 1411 aa27.97■■■□□ 2.07
POLE-217ENST00000541627 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.06
POLE-217ENST00000541627 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
POLE-217ENST00000541627 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
POLE-217ENST00000541627 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
POLE-217ENST00000541627 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
POLE-217ENST00000541627 GOLGA3Q08378 1498 aa27.77■■■□□ 2.04
POLE-217ENST00000541627 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
POLE-217ENST00000541627 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.02
POLE-217ENST00000541627 KIF21BO75037 1637 aa27.68■■■□□ 2.02
POLE-217ENST00000541627 CFTRP13569 1480 aa27.66■■■□□ 2.02
POLE-217ENST00000541627 CEP164Q9UPV0 1460 aa27.66■■■□□ 2.02
POLE-217ENST00000541627 CUX1P39880 1505 aa27.61■■■□□ 2.01
POLE-217ENST00000541627 RAPGEF2Q9Y4G8 1499 aa27.57■■■□□ 2
POLE-217ENST00000541627 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
POLE-217ENST00000541627 TTBK1Q5TCY1 1321 aaPredicted RBP27.48■■□□□ 1.99
POLE-217ENST00000541627 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
POLE-217ENST00000541627 CLIP1P30622 1438 aa27.42■■□□□ 1.98
POLE-217ENST00000541627 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
POLE-217ENST00000541627 ZEB1P37275 1124 aaPredicted RBP27.38■■□□□ 1.97
POLE-217ENST00000541627 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
POLE-217ENST00000541627 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
POLE-217ENST00000541627 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
POLE-217ENST00000541627 VPS8Q8N3P4 1428 aa27.27■■□□□ 1.96
POLE-217ENST00000541627 RANGAP1P46060 587 aaPredicted RBP27.26■■□□□ 1.95
POLE-217ENST00000541627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.25■■□□□ 1.95
POLE-217ENST00000541627 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
POLE-217ENST00000541627 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.93
POLE-217ENST00000541627 CUX2O14529 1486 aa27.13■■□□□ 1.93
POLE-217ENST00000541627 NESP48681 1621 aa27.11■■□□□ 1.93
POLE-217ENST00000541627 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
POLE-217ENST00000541627 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
POLE-217ENST00000541627 IGF1RP08069 1367 aa27.07■■□□□ 1.92
POLE-217ENST00000541627 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
POLE-217ENST00000541627 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
POLE-217ENST00000541627 APLP2Q06481 763 aa26.94■■□□□ 1.9
POLE-217ENST00000541627 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
POLE-217ENST00000541627 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
POLE-217ENST00000541627 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
POLE-217ENST00000541627 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
POLE-217ENST00000541627 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
POLE-217ENST00000541627 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
POLE-217ENST00000541627 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
POLE-217ENST00000541627 KANK4Q5T7N3 995 aaPredicted RBP26.84■■□□□ 1.89
POLE-217ENST00000541627 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
POLE-217ENST00000541627 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
POLE-217ENST00000541627 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
POLE-217ENST00000541627 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
POLE-217ENST00000541627 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
POLE-217ENST00000541627 CUL7Q14999 1698 aa26.61■■□□□ 1.85
POLE-217ENST00000541627 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
POLE-217ENST00000541627 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
POLE-217ENST00000541627 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
POLE-217ENST00000541627 TIAM1Q13009 1591 aa26.55■■□□□ 1.84
POLE-217ENST00000541627 P3H3Q8IVL6 736 aa26.54■■□□□ 1.84
POLE-217ENST00000541627 CTTNBP2Q8WZ74 1663 aa26.51■■□□□ 1.83
POLE-217ENST00000541627 MAP3K1Q13233 1512 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms