RNA–Protein interactions for RNA: ENST00000470108.5

BRWD1-212, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 3

Gene BRWD1, Length 1,176 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-212ENST00000470108 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
BRWD1-212ENST00000470108 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
BRWD1-212ENST00000470108 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
BRWD1-212ENST00000470108 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
BRWD1-212ENST00000470108 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
BRWD1-212ENST00000470108 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
BRWD1-212ENST00000470108 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
BRWD1-212ENST00000470108 ZCCHC6Q5VYS8 1495 aaKnown RBP13.9□□□□□ -0.18
BRWD1-212ENST00000470108 FOXD1Q16676 465 aa13.86□□□□□ -0.19
BRWD1-212ENST00000470108 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
BRWD1-212ENST00000470108 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
BRWD1-212ENST00000470108 ABCC9O60706 1549 aa13.59□□□□□ -0.23
BRWD1-212ENST00000470108 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
BRWD1-212ENST00000470108 NACADO15069 1562 aa13.52□□□□□ -0.25
BRWD1-212ENST00000470108 ADRA2BP18089 450 aa13.51□□□□□ -0.25
BRWD1-212ENST00000470108 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
BRWD1-212ENST00000470108 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
BRWD1-212ENST00000470108 SHROOM4Q9ULL8 1493 aa13.24□□□□□ -0.29
BRWD1-212ENST00000470108 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
BRWD1-212ENST00000470108 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
BRWD1-212ENST00000470108 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
BRWD1-212ENST00000470108 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
BRWD1-212ENST00000470108 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
BRWD1-212ENST00000470108 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
BRWD1-212ENST00000470108 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
BRWD1-212ENST00000470108 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
BRWD1-212ENST00000470108 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
BRWD1-212ENST00000470108 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
BRWD1-212ENST00000470108 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
BRWD1-212ENST00000470108 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
BRWD1-212ENST00000470108 MSH5O43196 834 aa12.65□□□□□ -0.38
BRWD1-212ENST00000470108 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
BRWD1-212ENST00000470108 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
BRWD1-212ENST00000470108 KCNA4P22459 653 aa12.59□□□□□ -0.39
BRWD1-212ENST00000470108 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
BRWD1-212ENST00000470108 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
BRWD1-212ENST00000470108 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
BRWD1-212ENST00000470108 WIZO95785 1651 aa12.53□□□□□ -0.4
BRWD1-212ENST00000470108 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
BRWD1-212ENST00000470108 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
BRWD1-212ENST00000470108 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
BRWD1-212ENST00000470108 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
BRWD1-212ENST00000470108 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
BRWD1-212ENST00000470108 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.44
BRWD1-212ENST00000470108 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
BRWD1-212ENST00000470108 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
BRWD1-212ENST00000470108 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
BRWD1-212ENST00000470108 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
BRWD1-212ENST00000470108 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
BRWD1-212ENST00000470108 CFTRP13569 1480 aa12.16□□□□□ -0.46
BRWD1-212ENST00000470108 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
BRWD1-212ENST00000470108 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
BRWD1-212ENST00000470108 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
BRWD1-212ENST00000470108 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
BRWD1-212ENST00000470108 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
BRWD1-212ENST00000470108 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
BRWD1-212ENST00000470108 ABCC8Q09428 1581 aa11.99□□□□□ -0.49
BRWD1-212ENST00000470108 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
BRWD1-212ENST00000470108 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
BRWD1-212ENST00000470108 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
BRWD1-212ENST00000470108 EEA1Q15075 1411 aa11.95□□□□□ -0.5
BRWD1-212ENST00000470108 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
BRWD1-212ENST00000470108 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
BRWD1-212ENST00000470108 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
BRWD1-212ENST00000470108 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
BRWD1-212ENST00000470108 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
BRWD1-212ENST00000470108 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
BRWD1-212ENST00000470108 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
BRWD1-212ENST00000470108 CUX1P39880 1505 aa11.89□□□□□ -0.51
BRWD1-212ENST00000470108 NESP48681 1621 aa11.89□□□□□ -0.51
BRWD1-212ENST00000470108 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
BRWD1-212ENST00000470108 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
BRWD1-212ENST00000470108 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
BRWD1-212ENST00000470108 SOGA1O94964 1423 aa11.78□□□□□ -0.52
BRWD1-212ENST00000470108 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
BRWD1-212ENST00000470108 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
BRWD1-212ENST00000470108 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
BRWD1-212ENST00000470108 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
BRWD1-212ENST00000470108 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
BRWD1-212ENST00000470108 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
BRWD1-212ENST00000470108 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
BRWD1-212ENST00000470108 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
BRWD1-212ENST00000470108 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
BRWD1-212ENST00000470108 WDR62O43379 1518 aa11.72□□□□□ -0.53
BRWD1-212ENST00000470108 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
BRWD1-212ENST00000470108 KIF21BO75037 1637 aa11.71□□□□□ -0.54
BRWD1-212ENST00000470108 CUX2O14529 1486 aa11.7□□□□□ -0.54
BRWD1-212ENST00000470108 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
BRWD1-212ENST00000470108 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
BRWD1-212ENST00000470108 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
BRWD1-212ENST00000470108 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
BRWD1-212ENST00000470108 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
BRWD1-212ENST00000470108 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
BRWD1-212ENST00000470108 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
BRWD1-212ENST00000470108 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
BRWD1-212ENST00000470108 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
BRWD1-212ENST00000470108 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
BRWD1-212ENST00000470108 IGF1RP08069 1367 aa11.63□□□□□ -0.55
BRWD1-212ENST00000470108 TARBP1Q13395 1621 aaKnown RBP11.61□□□□□ -0.55
BRWD1-212ENST00000470108 ZBTB22O15209 634 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms