Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.05□□□□□ -1.284e-6■■■■□ 22.1
MATR3P43243 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.374e-6■■■■□ 22.1
MATR3P43243 ATF2-215ENST00000435004 1115 ntTSL 56.37□□□□□ -1.394e-6■■■■□ 22.1
MATR3P43243 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.26□□□□□ -1.414e-6■■■■□ 22.1
MATR3P43243 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.13□□□□□ -1.434e-6■■■■□ 22.1
MATR3P43243 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.894e-6■■■■□ 22.1
MATR3P43243 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.34■□□□□ 0.852e-8■■■■□ 22.1
MATR3P43243 SUV39H2-208ENST00000433779 719 ntTSL 518.9■□□□□ 0.622e-8■■■■□ 22.1
MATR3P43243 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.532e-8■■■■□ 22.1
MATR3P43243 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.142e-8■■■■□ 22.1
MATR3P43243 SUV39H2-205ENST00000378331 2959 ntTSL 1 (best)10.25□□□□□ -0.772e-8■■■■□ 22.1
MATR3P43243 SUV39H2-203ENST00000358298 1611 ntTSL 56.58□□□□□ -1.362e-8■■■■□ 22.1
MATR3P43243 SUV39H2-207ENST00000420416 704 ntTSL 36.28□□□□□ -1.42e-8■■■■□ 22.1
MATR3P43243 SUV39H2-206ENST00000412254 688 ntTSL 55.34□□□□□ -1.552e-8■■■■□ 22.1
MATR3P43243 ZNF529-206ENST00000586458 2674 ntTSL 212.08□□□□□ -0.482e-8■■■■□ 22.1
MATR3P43243 ZNF529-203ENST00000585960 535 ntTSL 410.85□□□□□ -0.672e-8■■■■□ 22.1
MATR3P43243 ZNF529-207ENST00000587286 568 ntTSL 410.74□□□□□ -0.692e-8■■■■□ 22.1
MATR3P43243 ZNF529-205ENST00000586115 587 ntTSL 410.62□□□□□ -0.712e-8■■■■□ 22.1
MATR3P43243 ZNF529-204ENST00000585983 582 ntTSL 37.34□□□□□ -1.232e-8■■■■□ 22.1
MATR3P43243 CAMTA1-213ENST00000490738 538 ntTSL 229.43■■■□□ 2.31e-6■■■■□ 22.1
MATR3P43243 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.28■■□□□ 1.481e-6■■■■□ 22.1
MATR3P43243 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.51■■□□□ 1.191e-6■■■■□ 22.1
MATR3P43243 CAMTA1-209ENST00000476163 863 ntTSL 221.13■□□□□ 0.971e-6■■■■□ 22.1
MATR3P43243 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.511e-6■■■■□ 22.1
MATR3P43243 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC8.44□□□□□ -1.061e-6■■■■□ 22.1
MATR3P43243 CAMTA1-202ENST00000461311 431 ntTSL 24.83□□□□□ -1.641e-6■■■■□ 22.1
MATR3P43243 ZMYND8-209ENST00000441977 175 ntTSL 30.08□□□□□ -2.44e-7■■■■□ 22.1
MATR3P43243 MTSS1-218ENST00000529463 569 ntTSL 410□□□□□ -0.815e-7■■■■□ 22.1
MATR3P43243 BPHL-206ENST00000430655 2157 ntTSL 1 (best)25.77■■□□□ 1.721e-7■■■■□ 22.1
MATR3P43243 BPHL-205ENST00000424847 1563 ntTSL 1 (best)24.87■■□□□ 1.571e-7■■■■□ 22.1
MATR3P43243 BPHL-207ENST00000433912 1063 ntTSL 221.93■■□□□ 1.11e-7■■■■□ 22.1
MATR3P43243 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.71e-7■■■■□ 22.1
MATR3P43243 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.01■□□□□ 0.631e-7■■■■□ 22.1
MATR3P43243 BPHL-212ENST00000490918 3723 ntTSL 213.08□□□□□ -0.321e-7■■■■□ 22.1
MATR3P43243 BPHL-211ENST00000488487 1137 ntTSL 512.47□□□□□ -0.411e-7■■■■□ 22.1
MATR3P43243 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC10.13□□□□□ -0.791e-7■■■■□ 22.1
MATR3P43243 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.04□□□□□ -1.441e-7■■■■□ 22.1
MATR3P43243 RBM33-206ENST00000392761 2934 ntTSL 215.33■□□□□ 0.041e-6■■■■□ 22.1
MATR3P43243 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.546e-7■■■■□ 22.1
MATR3P43243 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC11.13□□□□□ -0.636e-7■■■■□ 22.1
MATR3P43243 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.716e-7■■■■□ 22.1
MATR3P43243 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.716e-7■■■■□ 22.1
MATR3P43243 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.57□□□□□ -0.726e-7■■■■□ 22.1
MATR3P43243 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC10.29□□□□□ -0.766e-7■■■■□ 22.1
MATR3P43243 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC10.05□□□□□ -0.86e-7■■■■□ 22.1
MATR3P43243 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.96□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.95□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.95□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.95□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.9□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.9□□□□□ -0.826e-7■■■■□ 22.1
MATR3P43243 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.54□□□□□ -0.886e-7■■■■□ 22.1
MATR3P43243 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.51□□□□□ -0.896e-7■■■■□ 22.1
MATR3P43243 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.51□□□□□ -0.896e-7■■■■□ 22.1
MATR3P43243 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.44□□□□□ -0.96e-7■■■■□ 22.1
MATR3P43243 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.4□□□□□ -0.96e-7■■■■□ 22.1
MATR3P43243 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.33□□□□□ -0.926e-7■■■■□ 22.1
MATR3P43243 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.32□□□□□ -0.926e-7■■■■□ 22.1
MATR3P43243 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.88□□□□□ -0.996e-7■■■■□ 22.1
MATR3P43243 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.78□□□□□ -16e-7■■■■□ 22.1
MATR3P43243 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.3□□□□□ -1.086e-7■■■■□ 22.1
MATR3P43243 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.3□□□□□ -1.086e-7■■■■□ 22.1
MATR3P43243 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.19□□□□□ -1.16e-7■■■■□ 22.1
MATR3P43243 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.07□□□□□ -1.126e-7■■■■□ 22.1
MATR3P43243 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.29□□□□□ -1.246e-7■■■■□ 22.1
MATR3P43243 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.29□□□□□ -1.246e-7■■■■□ 22.1
MATR3P43243 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.97■■□□□ 1.756e-7■■■■□ 22.1
MATR3P43243 D2HGDH-202ENST00000400769 2277 ntTSL 225.13■■□□□ 1.616e-7■■■■□ 22.1
MATR3P43243 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.346e-7■■■■□ 22.1
MATR3P43243 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)19.68■□□□□ 0.746e-7■■■■□ 22.1
MATR3P43243 D2HGDH-207ENST00000437164 269 ntTSL 515.79■□□□□ 0.126e-7■■■■□ 22.1
MATR3P43243 D2HGDH-204ENST00000417686 454 ntTSL 514.76□□□□□ -0.056e-7■■■■□ 22.1
MATR3P43243 D2HGDH-209ENST00000454048 234 ntTSL 54.53□□□□□ -1.686e-7■■■■□ 22.1
MATR3P43243 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.529e-7■■■■□ 22.1
MATR3P43243 RERE-207ENST00000464972 743 ntTSL 58.8□□□□□ -12e-6■■■■□ 22.1
MATR3P43243 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.961e-6■■■■□ 22.1
MATR3P43243 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC10.3□□□□□ -0.761e-6■■■■□ 22.1
MATR3P43243 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.17□□□□□ -1.11e-6■■■■□ 22.1
MATR3P43243 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.51□□□□□ -1.211e-6■■■■□ 22.1
MATR3P43243 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.39e-9■■■■□ 22.1
MATR3P43243 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.118e-8■■■■□ 22.1
MATR3P43243 RPRD1B-203ENST00000462548 2436 ntTSL 516.3■□□□□ 0.22e-7■■■■□ 22.1
MATR3P43243 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.422e-7■■■■□ 22.1
MATR3P43243 RPRD1B-202ENST00000449186 591 ntTSL 412.06□□□□□ -0.482e-7■■■■□ 22.1
MATR3P43243 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.131e-6■■■■□ 22
MATR3P43243 ZSWIM5-202ENST00000464588 390 ntTSL 316.64■□□□□ 0.251e-6■■■■□ 22
MATR3P43243 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.29■■■□□ 2.65e-13■■■■□ 22
MATR3P43243 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.855e-13■■■■□ 22
MATR3P43243 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.84■■□□□ 1.255e-13■■■■□ 22
MATR3P43243 SH3GL1-203ENST00000593591 1036 ntTSL 415.52■□□□□ 0.085e-13■■■■□ 22
MATR3P43243 SH3GL1-204ENST00000598219 619 ntTSL 38.59□□□□□ -1.035e-13■■■■□ 22
MATR3P43243 DLG1-212ENST00000436682 543 ntTSL 217.14■□□□□ 0.331e-6■■■■□ 22
MATR3P43243 DLG1-209ENST00000419553 582 ntTSL 213.48□□□□□ -0.251e-6■■■■□ 22
MATR3P43243 DLG1-226ENST00000485409 656 ntTSL 34.67□□□□□ -1.661e-6■■■■□ 22
MATR3P43243 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.074e-7■■■■□ 22
MATR3P43243 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.064e-7■■■■□ 22
MATR3P43243 NACA-209ENST00000548084 542 ntTSL 313.59□□□□□ -0.234e-7■■■■□ 22
MATR3P43243 NACA-212ENST00000549259 690 ntTSL 512.09□□□□□ -0.474e-7■■■■□ 22
MATR3P43243 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.524e-7■■■■□ 22
MATR3P43243 NACA-213ENST00000549855 711 ntTSL 510.43□□□□□ -0.744e-7■■■■□ 22
Retrieved 100 of 16,209 protein–RNA pairs in 142 ms