RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
PDE4D-226ENST00000546160 NISCHQ9Y2I1 1504 aa10.85□□□□□ -0.67
PDE4D-226ENST00000546160 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
PDE4D-226ENST00000546160 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
PDE4D-226ENST00000546160 SHROOM4Q9ULL8 1493 aa10.14□□□□□ -0.79
PDE4D-226ENST00000546160 APLP2Q06481 763 aa10.1□□□□□ -0.79
PDE4D-226ENST00000546160 PELP1Q8IZL8 1130 aaKnown RBP10.08□□□□□ -0.8
PDE4D-226ENST00000546160 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
PDE4D-226ENST00000546160 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-226ENST00000546160 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
PDE4D-226ENST00000546160 ATP1B4Q9UN42 357 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-226ENST00000546160 CCER1Q8TC90 406 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-226ENST00000546160 UBTFP17480 764 aaKnown RBP9.61□□□□□ -0.87
PDE4D-226ENST00000546160 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
PDE4D-226ENST00000546160 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-226ENST00000546160 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
PDE4D-226ENST00000546160 TTBK1Q5TCY1 1321 aaPredicted RBP9.51□□□□□ -0.89
PDE4D-226ENST00000546160 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
PDE4D-226ENST00000546160 NEFLP07196 543 aa9.43□□□□□ -0.9
PDE4D-226ENST00000546160 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
PDE4D-226ENST00000546160 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
PDE4D-226ENST00000546160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-226ENST00000546160 HNRNPUL2Q1KMD3 747 aaKnown RBP9.34□□□□□ -0.91
PDE4D-226ENST00000546160 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
PDE4D-226ENST00000546160 ABCC9O60706 1549 aa9.29□□□□□ -0.92
PDE4D-226ENST00000546160 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.93
PDE4D-226ENST00000546160 MYT1Q01538 1121 aa9.21□□□□□ -0.94
PDE4D-226ENST00000546160 ITGAEP38570 1179 aa9.16□□□□□ -0.94
PDE4D-226ENST00000546160 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
PDE4D-226ENST00000546160 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
PDE4D-226ENST00000546160 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
PDE4D-226ENST00000546160 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
PDE4D-226ENST00000546160 PPARGC1BQ86YN6 1023 aaKnown RBP9.1□□□□□ -0.95
PDE4D-226ENST00000546160 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
PDE4D-226ENST00000546160 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
PDE4D-226ENST00000546160 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
PDE4D-226ENST00000546160 CHIC1Q5VXU3 224 aa9.05□□□□□ -0.96
PDE4D-226ENST00000546160 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
PDE4D-226ENST00000546160 LOC105371045A0A1W2PR82 267 aa8.99□□□□□ -0.97
PDE4D-226ENST00000546160 HRCP23327 699 aa8.99□□□□□ -0.97
PDE4D-226ENST00000546160 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-226ENST00000546160 FBLN2P98095 1184 aa8.98□□□□□ -0.97
PDE4D-226ENST00000546160 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.97
PDE4D-226ENST00000546160 ZBTB47Q9UFB7 747 aaPredicted RBP8.96□□□□□ -0.97
PDE4D-226ENST00000546160 CLSPNQ9HAW4 1339 aa8.96□□□□□ -0.98
PDE4D-226ENST00000546160 NEFMP07197 916 aa8.95□□□□□ -0.98
PDE4D-226ENST00000546160 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
PDE4D-226ENST00000546160 NACADO15069 1562 aa8.95□□□□□ -0.98
PDE4D-226ENST00000546160 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
PDE4D-226ENST00000546160 ANP32CO43423 234 aa8.91□□□□□ -0.98
PDE4D-226ENST00000546160 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.99
PDE4D-226ENST00000546160 BCANQ96GW7 911 aa8.89□□□□□ -0.99
PDE4D-226ENST00000546160 CNGB1Q14028 1251 aaPredicted RBP8.88□□□□□ -0.99
PDE4D-226ENST00000546160 NPM1P06748 294 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDE4D-226ENST00000546160 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
PDE4D-226ENST00000546160 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
PDE4D-226ENST00000546160 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
PDE4D-226ENST00000546160 CSRNP3Q8WYN3 585 aa8.83□□□□□ -1
PDE4D-226ENST00000546160 CANXP27824 592 aaKnown RBP8.81□□□□□ -1
PDE4D-226ENST00000546160 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
PDE4D-226ENST00000546160 SLC24A1O60721 1099 aa8.8□□□□□ -1
PDE4D-226ENST00000546160 STAG3Q9UJ98 1225 aa8.79□□□□□ -1
PDE4D-226ENST00000546160 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-226ENST00000546160 P3H3Q8IVL6 736 aa8.75□□□□□ -1.01
PDE4D-226ENST00000546160 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
PDE4D-226ENST00000546160 EEA1Q15075 1411 aa8.71□□□□□ -1.01
PDE4D-226ENST00000546160 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.01
PDE4D-226ENST00000546160 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.02
PDE4D-226ENST00000546160 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
PDE4D-226ENST00000546160 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
PDE4D-226ENST00000546160 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-226ENST00000546160 TSPY4P0CV99 314 aa8.68□□□□□ -1.02
PDE4D-226ENST00000546160 TSPY10P0CW01 314 aa8.68□□□□□ -1.02
PDE4D-226ENST00000546160 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
PDE4D-226ENST00000546160 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
PDE4D-226ENST00000546160 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
PDE4D-226ENST00000546160 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
PDE4D-226ENST00000546160 ANP32AP39687 249 aaKnown RBP8.64□□□□□ -1.03
PDE4D-226ENST00000546160 UPF2Q9HAU5 1272 aaKnown RBP8.64□□□□□ -1.03
PDE4D-226ENST00000546160 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
PDE4D-226ENST00000546160 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-226ENST00000546160 ANP32BQ92688 251 aaKnown RBP8.61□□□□□ -1.03
PDE4D-226ENST00000546160 KIF27Q86VH2 1401 aa8.61□□□□□ -1.03
PDE4D-226ENST00000546160 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
PDE4D-226ENST00000546160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDE4D-226ENST00000546160 CLIP1P30622 1438 aa8.58□□□□□ -1.04
PDE4D-226ENST00000546160 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDE4D-226ENST00000546160 HSP90AA1P07900 732 aaKnown RBP8.58□□□□□ -1.04
PDE4D-226ENST00000546160 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
PDE4D-226ENST00000546160 PLEKHD1A6NEE1 506 aa8.57□□□□□ -1.04
PDE4D-226ENST00000546160 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
PDE4D-226ENST00000546160 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
PDE4D-226ENST00000546160 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
PDE4D-226ENST00000546160 PLPPR3Q6T4P5 718 aa8.55□□□□□ -1.04
PDE4D-226ENST00000546160 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
PDE4D-226ENST00000546160 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
PDE4D-226ENST00000546160 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
PDE4D-226ENST00000546160 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
PDE4D-226ENST00000546160 FHAD1B1AJZ9 1412 aa8.53□□□□□ -1.04
PDE4D-226ENST00000546160 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms