Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQA1P01909 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 AC092720.2-201ENST00000602388 1665 ntBASIC15.23■□□□□ 0.03
HLA-DQA1P01909 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 TSPY9P-201ENST00000440215 945 ntBASIC15.23■□□□□ 0.03
HLA-DQA1P01909 TSPY11P-201ENST00000442607 1045 ntBASIC15.23■□□□□ 0.03
HLA-DQA1P01909 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DQA1P01909 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 Z92544.1-202ENST00000571933 1220 ntBASIC15.22■□□□□ 0.03
HLA-DQA1P01909 MTDHP2-201ENST00000601468 714 ntBASIC15.22■□□□□ 0.03
HLA-DQA1P01909 MIR4787-201ENST00000607364 84 ntBASIC15.22■□□□□ 0.03
HLA-DQA1P01909 AC068587.7-201ENST00000641602 218 ntBASIC15.22■□□□□ 0.03
HLA-DQA1P01909 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 AC021242.3-201ENST00000607598 1377 ntBASIC15.22■□□□□ 0.03
HLA-DQA1P01909 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQA1P01909 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQA1P01909 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-DQA1P01909 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-DQA1P01909 AC079598.2-202ENST00000546624 1451 ntBASIC15.2■□□□□ 0.02
HLA-DQA1P01909 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQA1P01909 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms