Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GSC2O15499 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GSC2O15499 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GSC2O15499 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GSC2O15499 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
GSC2O15499 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.47■□□□□ 0.71
GSC2O15499 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GSC2O15499 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GSC2O15499 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.47■□□□□ 0.71
GSC2O15499 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GSC2O15499 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.46■□□□□ 0.71
GSC2O15499 AL049812.1-201ENST00000432563 2267 ntBASIC19.46■□□□□ 0.71
GSC2O15499 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GSC2O15499 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.46■□□□□ 0.71
GSC2O15499 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.46■□□□□ 0.71
GSC2O15499 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.46■□□□□ 0.71
GSC2O15499 SMUG1P1-201ENST00000590640 811 ntBASIC19.46■□□□□ 0.71
GSC2O15499 MIR4787-201ENST00000607364 84 ntBASIC19.46■□□□□ 0.71
GSC2O15499 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.46■□□□□ 0.71
GSC2O15499 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.46■□□□□ 0.71
GSC2O15499 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.46■□□□□ 0.71
GSC2O15499 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GSC2O15499 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
GSC2O15499 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GSC2O15499 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GSC2O15499 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
GSC2O15499 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.45■□□□□ 0.7
GSC2O15499 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
GSC2O15499 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
GSC2O15499 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GSC2O15499 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
GSC2O15499 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GSC2O15499 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GSC2O15499 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
GSC2O15499 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GSC2O15499 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.44■□□□□ 0.7
GSC2O15499 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.44■□□□□ 0.7
GSC2O15499 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
GSC2O15499 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.44■□□□□ 0.7
GSC2O15499 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GSC2O15499 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.43■□□□□ 0.7
GSC2O15499 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GSC2O15499 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.43■□□□□ 0.7
GSC2O15499 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GSC2O15499 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GSC2O15499 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.43■□□□□ 0.7
GSC2O15499 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GSC2O15499 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms