Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 CCDC92B-201ENST00000575506 885 ntBASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 RARRES2P11-201ENST00000635158 484 ntBASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3EA5X5Y0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 SLC7A5P1-201ENST00000568957 537 ntBASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3EA5X5Y0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR3EA5X5Y0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 MIR638-201ENST00000385237 100 ntBASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 YBX1P1-201ENST00000445822 960 ntBASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 TERF1P2-201ENST00000583350 1212 ntBASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 AC243732.1-201ENST00000612648 864 ntBASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
HTR3EA5X5Y0 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.58
HTR3EA5X5Y0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3EA5X5Y0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3EA5X5Y0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3EA5X5Y0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.64■□□□□ 0.58
HTR3EA5X5Y0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.64■□□□□ 0.57
HTR3EA5X5Y0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms