Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 OGFOD3-212ENST00000583897 896 ntTSL 516.34■□□□□ 0.213e-6■■□□□ 13.3
PRPF8Q6P2Q9 OGFOD3-207ENST00000579407 759 ntTSL 210.39□□□□□ -0.753e-6■■□□□ 13.3
PRPF8Q6P2Q9 AEN-204ENST00000558327 883 ntTSL 221.38■■□□□ 1.011e-12■■□□□ 13.3
PRPF8Q6P2Q9 AEN-205ENST00000559528 895 ntTSL 220.23■□□□□ 0.831e-12■■□□□ 13.3
PRPF8Q6P2Q9 AEN-206ENST00000560174 461 ntTSL 320.07■□□□□ 0.81e-12■■□□□ 13.3
PRPF8Q6P2Q9 PRRC2A-210ENST00000483470 916 ntTSL 27.03□□□□□ -1.288e-12■■□□□ 13.3
PRPF8Q6P2Q9 COASY-214ENST00000591779 994 ntTSL 213.04□□□□□ -0.322e-9■■□□□ 13.3
PRPF8Q6P2Q9 DLC1-207ENST00000510250 1925 ntTSL 29.8□□□□□ -0.843e-6■■□□□ 13.3
PRPF8Q6P2Q9 OTULIN-204ENST00000507335 742 ntTSL 222.66■■□□□ 1.222e-11■■□□□ 13.3
PRPF8Q6P2Q9 NKIRAS2-213ENST00000587028 535 ntTSL 421.53■■□□□ 1.044e-6■■□□□ 13.3
PRPF8Q6P2Q9 PBRM1-213ENST00000431678 809 ntTSL 520.53■□□□□ 0.884e-6■■□□□ 13.3
PRPF8Q6P2Q9 C14orf80-216ENST00000546492 965 ntTSL 219.8■□□□□ 0.764e-6■■□□□ 13.3
PRPF8Q6P2Q9 MAP4K5-204ENST00000554273 484 ntTSL 319.75■□□□□ 0.754e-6■■□□□ 13.3
PRPF8Q6P2Q9 SIX4-203ENST00000556952 1573 ntTSL 519.27■□□□□ 0.674e-6■■□□□ 13.3
PRPF8Q6P2Q9 RNF111-205ENST00000559160 900 ntTSL 319.02■□□□□ 0.644e-6■■□□□ 13.3
PRPF8Q6P2Q9 SP2-206ENST00000642065 265 nt18.92■□□□□ 0.624e-6■■□□□ 13.3
PRPF8Q6P2Q9 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.6■□□□□ 0.574e-6■■□□□ 13.3
PRPF8Q6P2Q9 SP2-204ENST00000637314 531 ntTSL 218.6■□□□□ 0.574e-6■■□□□ 13.3
PRPF8Q6P2Q9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.52■□□□□ 0.564e-6■■□□□ 13.3
PRPF8Q6P2Q9 HOXA3-204ENST00000521401 598 ntTSL 318.28■□□□□ 0.524e-6■■□□□ 13.3
PRPF8Q6P2Q9 HOXA3-206ENST00000522788 581 ntTSL 318.28■□□□□ 0.524e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-216ENST00000566681 621 ntTSL 418.26■□□□□ 0.514e-6■■□□□ 13.3
PRPF8Q6P2Q9 GADD45B-203ENST00000586759 517 nt18.22■□□□□ 0.514e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.464e-6■■□□□ 13.3
PRPF8Q6P2Q9 NCOR1-207ENST00000430577 1204 ntTSL 517.89■□□□□ 0.454e-6■■□□□ 13.3
PRPF8Q6P2Q9 ETHE1-206ENST00000602138 648 ntTSL 317.82■□□□□ 0.444e-6■■□□□ 13.3
PRPF8Q6P2Q9 ETHE1-203ENST00000595115 593 ntTSL 217.67■□□□□ 0.424e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.412e-28■■□□□ 13.3
PRPF8Q6P2Q9 METRN-202ENST00000564661 1174 ntTSL 1 (best)17.2■□□□□ 0.344e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-217ENST00000457212 905 ntTSL 517.1■□□□□ 0.334e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-206ENST00000437122 861 ntTSL 217.07■□□□□ 0.324e-6■■□□□ 13.3
PRPF8Q6P2Q9 WWP1-210ENST00000523863 796 ntTSL 316.95■□□□□ 0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.95■□□□□ 0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.95■□□□□ 0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-210ENST00000426266 936 ntTSL 316.93■□□□□ 0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.78■□□□□ 0.284e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF134-204ENST00000600883 590 ntTSL 416.78■□□□□ 0.284e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-207ENST00000553524 707 ntTSL 316.73■□□□□ 0.274e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF134-202ENST00000597975 559 ntTSL 1 (best)16.58■□□□□ 0.254e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-207ENST00000416319 1113 ntTSL 516.47■□□□□ 0.234e-6■■□□□ 13.3
PRPF8Q6P2Q9 NCOR1-226ENST00000585296 983 ntTSL 1 (best)16.46■□□□□ 0.234e-6■■□□□ 13.3
PRPF8Q6P2Q9 SEPSECS-205ENST00000513285 561 ntTSL 416.42■□□□□ 0.224e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.214e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.35■□□□□ 0.214e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.34■□□□□ 0.212e-11■■□□□ 13.3
PRPF8Q6P2Q9 ALDH16A1-206ENST00000598015 287 ntTSL 316.18■□□□□ 0.184e-6■■□□□ 13.3
PRPF8Q6P2Q9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 PHYHD1-213ENST00000487504 491 ntTSL 216.12■□□□□ 0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC004951.3-201ENST00000418645 1148 ntBASIC16.11■□□□□ 0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.99■□□□□ 0.154e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.97■□□□□ 0.154e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.89■□□□□ 0.134e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-210ENST00000565760 658 ntTSL 315.8■□□□□ 0.124e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.74■□□□□ 0.114e-6■■□□□ 13.3
PRPF8Q6P2Q9 SEPSECS-206ENST00000514585 1494 ntTSL 1 (best)15.68■□□□□ 0.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-215ENST00000566584 676 ntTSL 515.67■□□□□ 0.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-6■■□□□ 13.3
PRPF8Q6P2Q9 PHYHD1-206ENST00000419872 753 ntTSL 315.52■□□□□ 0.084e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.084e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-218ENST00000554772 562 ntTSL 315.44■□□□□ 0.064e-6■■□□□ 13.3
PRPF8Q6P2Q9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.4■□□□□ 0.064e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-216ENST00000449971 1056 ntTSL 515.37■□□□□ 0.054e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.044e-6■■□□□ 13.3
PRPF8Q6P2Q9 HDAC7-204ENST00000417107 569 ntTSL 415.27■□□□□ 0.034e-6■■□□□ 13.3
PRPF8Q6P2Q9 MICAL3-205ENST00000424046 542 ntTSL 415.26■□□□□ 0.034e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-214ENST00000566481 538 ntTSL 415.24■□□□□ 0.034e-6■■□□□ 13.3
PRPF8Q6P2Q9 METTL22-209ENST00000563958 614 ntTSL 315.13■□□□□ 0.014e-6■■□□□ 13.3
PRPF8Q6P2Q9 MTFMT-205ENST00000559633 421 ntTSL 215.1■□□□□ 0.014e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.01□□□□□ -0.014e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.014e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-219ENST00000568671 608 ntTSL 214.98□□□□□ -0.014e-6■■□□□ 13.3
PRPF8Q6P2Q9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.022e-6■■□□□ 13.3
PRPF8Q6P2Q9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.024e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-216ENST00000575130 579 ntTSL 414.81□□□□□ -0.042e-11■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.77□□□□□ -0.044e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-236ENST00000556783 567 ntTSL 514.74□□□□□ -0.054e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-208ENST00000572866 434 ntTSL 314.71□□□□□ -0.052e-11■■□□□ 13.3
PRPF8Q6P2Q9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.082e-7■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-205ENST00000565066 845 ntTSL 514.53□□□□□ -0.087e-7■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-212ENST00000434658 1817 ntTSL 514.52□□□□□ -0.084e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.094e-6■■□□□ 13.3
PRPF8Q6P2Q9 RNF111-208ENST00000559757 541 ntTSL 414.46□□□□□ -0.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-239ENST00000557239 471 ntTSL 414.35□□□□□ -0.114e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.114e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-221ENST00000577079 814 ntAPPRIS ALT2 TSL 314.22□□□□□ -0.132e-11■■□□□ 13.3
PRPF8Q6P2Q9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.164e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-208ENST00000564247 1127 ntTSL 214.04□□□□□ -0.164e-6■■□□□ 13.3
PRPF8Q6P2Q9 HPS1-207ENST00000465957 922 ntTSL 214□□□□□ -0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-206ENST00000565825 583 ntTSL 313.99□□□□□ -0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-204ENST00000564876 542 ntTSL 413.97□□□□□ -0.174e-6■■□□□ 13.3
PRPF8Q6P2Q9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.94□□□□□ -0.184e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.87□□□□□ -0.194e-6■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-210ENST00000569550 557 ntTSL 313.84□□□□□ -0.197e-7■■□□□ 13.3
PRPF8Q6P2Q9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.24e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC004997.1-202ENST00000434987 1811 ntTSL 213.78□□□□□ -0.24e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-222ENST00000621967 1901 ntTSL 213.72□□□□□ -0.214e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.68□□□□□ -0.224e-6■■□□□ 13.3
PRPF8Q6P2Q9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.224e-6■■□□□ 13.3
Retrieved 100 of 73,762 protein–RNA pairs in 1373.9 ms