RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 NISCHQ9Y2I1 1504 aa47.45■■■■■ 5.19
FAM3A-207ENST00000416319 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
FAM3A-207ENST00000416319 ABCC9O60706 1549 aa40.66■■■■■ 4.1
FAM3A-207ENST00000416319 ZCCHC6Q5VYS8 1495 aaKnown RBP39.61■■■■□ 3.93
FAM3A-207ENST00000416319 NACADO15069 1562 aa39.43■■■■□ 3.9
FAM3A-207ENST00000416319 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
FAM3A-207ENST00000416319 DCAF8L2P0C7V8 631 aa39.39■■■■□ 3.9
FAM3A-207ENST00000416319 DCAF1Q9Y4B6 1507 aa39.35■■■■□ 3.89
FAM3A-207ENST00000416319 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
FAM3A-207ENST00000416319 UNC13AQ9UPW8 1703 aa38.26■■■■□ 3.72
FAM3A-207ENST00000416319 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
FAM3A-207ENST00000416319 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
FAM3A-207ENST00000416319 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
FAM3A-207ENST00000416319 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
FAM3A-207ENST00000416319 EIF4G1Q04637 1599 aaKnown RBP37.08■■■■□ 3.53
FAM3A-207ENST00000416319 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
FAM3A-207ENST00000416319 CECR2Q9BXF3 1484 aa36.87■■■■□ 3.49
FAM3A-207ENST00000416319 CC2D2AQ9P2K1 1620 aa36.8■■■■□ 3.48
FAM3A-207ENST00000416319 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
FAM3A-207ENST00000416319 SMARCA4P51532 1647 aa36.68■■■■□ 3.46
FAM3A-207ENST00000416319 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
FAM3A-207ENST00000416319 ATAD2BQ9ULI0 1458 aa36.45■■■■□ 3.43
FAM3A-207ENST00000416319 SMARCA2P51531 1590 aa36.42■■■■□ 3.42
FAM3A-207ENST00000416319 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
FAM3A-207ENST00000416319 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
FAM3A-207ENST00000416319 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
FAM3A-207ENST00000416319 HMGXB3Q12766 1538 aa36.23■■■■□ 3.39
FAM3A-207ENST00000416319 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
FAM3A-207ENST00000416319 WIZO95785 1651 aa36.07■■■■□ 3.37
FAM3A-207ENST00000416319 TOP2AP11388 1531 aaKnown RBP35.82■■■■□ 3.32
FAM3A-207ENST00000416319 SUPT5HO00267 1087 aaKnown RBP35.57■■■■□ 3.28
FAM3A-207ENST00000416319 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
FAM3A-207ENST00000416319 CADPSQ9ULU8 1353 aa35.37■■■■□ 3.25
FAM3A-207ENST00000416319 LAMC3Q9Y6N6 1575 aa35.33■■■■□ 3.25
FAM3A-207ENST00000416319 NESP48681 1621 aa35.29■■■■□ 3.24
FAM3A-207ENST00000416319 CFTRP13569 1480 aa35.23■■■■□ 3.23
FAM3A-207ENST00000416319 PDS5BQ9NTI5 1447 aa35.14■■■■□ 3.22
FAM3A-207ENST00000416319 ERCC6Q03468 1493 aa35.05■■■■□ 3.2
FAM3A-207ENST00000416319 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
FAM3A-207ENST00000416319 CEP164Q9UPV0 1460 aa34.82■■■■□ 3.16
FAM3A-207ENST00000416319 KIF21AQ7Z4S6 1674 aa34.8■■■■□ 3.16
FAM3A-207ENST00000416319 PRDM2Q13029 1718 aa34.8■■■■□ 3.16
FAM3A-207ENST00000416319 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
FAM3A-207ENST00000416319 THOC2Q8NI27 1593 aaKnown RBP34.68■■■■□ 3.14
FAM3A-207ENST00000416319 CUX2O14529 1486 aa34.61■■■■□ 3.13
FAM3A-207ENST00000416319 WDR62O43379 1518 aa34.58■■■■□ 3.13
FAM3A-207ENST00000416319 URB2Q14146 1524 aaKnown RBP34.51■■■■□ 3.12
FAM3A-207ENST00000416319 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
FAM3A-207ENST00000416319 TOPBP1Q92547 1522 aa34.38■■■■□ 3.09
FAM3A-207ENST00000416319 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
FAM3A-207ENST00000416319 CUX1P39880 1505 aa34.25■■■■□ 3.07
FAM3A-207ENST00000416319 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
FAM3A-207ENST00000416319 POLA1P09884 1462 aaPredicted RBP34.12■■■■□ 3.05
FAM3A-207ENST00000416319 IFT140Q96RY7 1462 aa34.12■■■■□ 3.05
FAM3A-207ENST00000416319 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.05
FAM3A-207ENST00000416319 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
FAM3A-207ENST00000416319 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
FAM3A-207ENST00000416319 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
FAM3A-207ENST00000416319 SOGA1O94964 1423 aa34■■■■□ 3.03
FAM3A-207ENST00000416319 TARBP1Q13395 1621 aaKnown RBP33.95■■■■□ 3.03
FAM3A-207ENST00000416319 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
FAM3A-207ENST00000416319 ZNF608Q9ULD9 1512 aaPredicted RBP33.86■■■■□ 3.01
FAM3A-207ENST00000416319 ABCA10Q8WWZ4 1543 aa33.82■■■■□ 3
FAM3A-207ENST00000416319 WDR97A6NE52 1622 aa33.79■■■■□ 3
FAM3A-207ENST00000416319 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
FAM3A-207ENST00000416319 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.994e-7■■■□□ 18.5
FAM3A-207ENST00000416319 EIF4G3O43432 1585 aaKnown RBP33.71■■■□□ 2.99
FAM3A-207ENST00000416319 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
FAM3A-207ENST00000416319 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
FAM3A-207ENST00000416319 ABCA5Q8WWZ7 1642 aa33.58■■■□□ 2.97
FAM3A-207ENST00000416319 GRIN2BQ13224 1484 aa33.57■■■□□ 2.97
FAM3A-207ENST00000416319 CHIC1Q5VXU3 224 aa33.49■■■□□ 2.95
FAM3A-207ENST00000416319 KIF27Q86VH2 1401 aa33.49■■■□□ 2.95
FAM3A-207ENST00000416319 MAGI1Q96QZ7 1491 aaPredicted RBP33.45■■■□□ 2.95
FAM3A-207ENST00000416319 SNAPC4Q5SXM2 1469 aa33.43■■■□□ 2.94
FAM3A-207ENST00000416319 ERICH3Q5RHP9 1530 aa33.41■■■□□ 2.94
FAM3A-207ENST00000416319 PBRM1Q86U86 1689 aa33.38■■■□□ 2.93
FAM3A-207ENST00000416319 IGF1RP08069 1367 aa33.32■■■□□ 2.92
FAM3A-207ENST00000416319 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
FAM3A-207ENST00000416319 FHAD1B1AJZ9 1412 aa33.28■■■□□ 2.92
FAM3A-207ENST00000416319 OSCARQ8IYS5 282 aa33.25■■■□□ 2.91
FAM3A-207ENST00000416319 CHMP7Q8WUX9 453 aaPredicted RBP33.25■■■□□ 2.91
FAM3A-207ENST00000416319 ADAMTS12P58397 1594 aa33.23■■■□□ 2.91
FAM3A-207ENST00000416319 FBLN2P98095 1184 aa33.22■■■□□ 2.91
FAM3A-207ENST00000416319 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.91
FAM3A-207ENST00000416319 EEA1Q15075 1411 aa33.14■■■□□ 2.9
FAM3A-207ENST00000416319 CHD1O14646 1710 aa33.13■■■□□ 2.89
FAM3A-207ENST00000416319 CUL7Q14999 1698 aa33.13■■■□□ 2.89
FAM3A-207ENST00000416319 GRIN2AQ12879 1464 aa33.12■■■□□ 2.89
FAM3A-207ENST00000416319 CARMIL1Q5VZK9 1371 aa33.11■■■□□ 2.89
FAM3A-207ENST00000416319 DNAJC5Q9H3Z4 198 aa33.11■■■□□ 2.89
FAM3A-207ENST00000416319 CSRNP3Q8WYN3 585 aa33.01■■■□□ 2.87
FAM3A-207ENST00000416319 NUP160Q12769 1436 aa33■■■□□ 2.87
FAM3A-207ENST00000416319 PRXQ9BXM0 1461 aa32.95■■■□□ 2.87
FAM3A-207ENST00000416319 RAPGEF2Q9Y4G8 1499 aa32.94■■■□□ 2.86
FAM3A-207ENST00000416319 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
FAM3A-207ENST00000416319 CEP170Q5SW79 1584 aa32.88■■■□□ 2.85
FAM3A-207ENST00000416319 FAM9AQ8IZU1 332 aaPredicted RBP32.84■■■□□ 2.85
FAM3A-207ENST00000416319 KIAA0586Q9BVV6 1533 aa32.77■■■□□ 2.84
FAM3A-207ENST00000416319 KIF21BO75037 1637 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms