RNA–Protein interactions for RNA: ENST00000483470.1

PRRC2A-210, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 2

Gene PRRC2A, Length 916 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-210ENST00000483470 AEBP2Q6ZN18 517 aaPredicted RBP36.37■■■■□ 3.41
PRRC2A-210ENST00000483470 CHIC1Q5VXU3 224 aa34.02■■■■□ 3.04
PRRC2A-210ENST00000483470 SENP3Q9H4L4 574 aaPredicted RBP31.21■■■□□ 2.59
PRRC2A-210ENST00000483470 PHF23Q9BUL5 403 aaPredicted RBP30.65■■■□□ 2.5
PRRC2A-210ENST00000483470 FOXD1Q16676 465 aa29.17■■■□□ 2.26
PRRC2A-210ENST00000483470 POTEDQ86YR6 584 aa28.49■■■□□ 2.15
PRRC2A-210ENST00000483470 MSH5O43196 834 aa27.68■■■□□ 2.02
PRRC2A-210ENST00000483470 PIAS4Q8N2W9 510 aaPredicted RBP27.03■■□□□ 1.92
PRRC2A-210ENST00000483470 PPP6R1Q9UPN7 881 aa26.56■■□□□ 1.84
PRRC2A-210ENST00000483470 PLPPR3Q6T4P5 718 aa26.54■■□□□ 1.84
PRRC2A-210ENST00000483470 ADRA2BP18089 450 aa26.41■■□□□ 1.82
PRRC2A-210ENST00000483470 DMRT2Q9Y5R5 561 aa24.61■■□□□ 1.53
PRRC2A-210ENST00000483470 MAPK8IP2Q13387 824 aaPredicted RBP24.52■■□□□ 1.52
PRRC2A-210ENST00000483470 CACNB1Q02641 598 aaPredicted RBP24.25■■□□□ 1.47
PRRC2A-210ENST00000483470 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
PRRC2A-210ENST00000483470 DCAF8L1A6NGE4 600 aa23.57■■□□□ 1.36
PRRC2A-210ENST00000483470 RNF39Q9H2S5 420 aa23.52■■□□□ 1.36
PRRC2A-210ENST00000483470 HOXD11P31277 338 aaPredicted RBP23.37■■□□□ 1.33
PRRC2A-210ENST00000483470 C1QBPQ07021 282 aaKnown RBP23.15■■□□□ 1.3
PRRC2A-210ENST00000483470 PPP4R3CPQ6ZMV5 832 aa23.12■■□□□ 1.29
PRRC2A-210ENST00000483470 RNF216Q9NWF9 866 aaPredicted RBP22.95■■□□□ 1.26
PRRC2A-210ENST00000483470 CNKSR2Q8WXI2 1034 aa22.92■■□□□ 1.26
PRRC2A-210ENST00000483470 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
PRRC2A-210ENST00000483470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.157e-9■□□□□ 9.4
PRRC2A-210ENST00000483470 POTEHQ6S545 545 aa22.15■■□□□ 1.14
PRRC2A-210ENST00000483470 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
PRRC2A-210ENST00000483470 DSG3P32926 999 aa21.71■■□□□ 1.07
PRRC2A-210ENST00000483470 U3KPZ7 1027 aaPredicted RBP21.67■■□□□ 1.06
PRRC2A-210ENST00000483470 NPM3O75607 178 aaKnown RBP21.65■■□□□ 1.06
PRRC2A-210ENST00000483470 CAPN15O75808 1086 aa21.6■■□□□ 1.05
PRRC2A-210ENST00000483470 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
PRRC2A-210ENST00000483470 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
PRRC2A-210ENST00000483470 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
PRRC2A-210ENST00000483470 APLP2Q06481 763 aa21.01■□□□□ 0.95
PRRC2A-210ENST00000483470 ABCB7O75027 752 aa21■□□□□ 0.95
PRRC2A-210ENST00000483470 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
PRRC2A-210ENST00000483470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
PRRC2A-210ENST00000483470 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
PRRC2A-210ENST00000483470 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
PRRC2A-210ENST00000483470 CHRDL2Q6WN34 429 aa20.64■□□□□ 0.89
PRRC2A-210ENST00000483470 SAMD1Q6SPF0 538 aaPredicted RBP20.61■□□□□ 0.89
PRRC2A-210ENST00000483470 KCNA4P22459 653 aa20.42■□□□□ 0.86
PRRC2A-210ENST00000483470 SP7Q8TDD2 431 aaPredicted RBP20.36■□□□□ 0.85
PRRC2A-210ENST00000483470 POLA2Q14181 598 aa20.28■□□□□ 0.84
PRRC2A-210ENST00000483470 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
PRRC2A-210ENST00000483470 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
PRRC2A-210ENST00000483470 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
PRRC2A-210ENST00000483470 PIP4P2Q8N4L2 257 aa19.95■□□□□ 0.78
PRRC2A-210ENST00000483470 REM2Q8IYK8 340 aaPredicted RBP19.88■□□□□ 0.77
PRRC2A-210ENST00000483470 ZBTB12Q9Y330 459 aaPredicted RBP19.86■□□□□ 0.77
PRRC2A-210ENST00000483470 HAX1O00165 279 aa19.81■□□□□ 0.76
PRRC2A-210ENST00000483470 FXR2P51116 673 aaKnown RBP eCLIP19.71■□□□□ 0.752e-13■□□□□ 10.1
PRRC2A-210ENST00000483470 PITPNM1O00562 1244 aa19.68■□□□□ 0.74
PRRC2A-210ENST00000483470 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
PRRC2A-210ENST00000483470 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
PRRC2A-210ENST00000483470 EVX2Q03828 476 aa19.49■□□□□ 0.71
PRRC2A-210ENST00000483470 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
PRRC2A-210ENST00000483470 SPDYE2BA6NHP3 402 aa19.16■□□□□ 0.66
PRRC2A-210ENST00000483470 SPDYE6P0CI01 402 aa19.16■□□□□ 0.66
PRRC2A-210ENST00000483470 PRKAR2AP13861 404 aaKnown RBP19.16■□□□□ 0.66
PRRC2A-210ENST00000483470 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
PRRC2A-210ENST00000483470 C19orf67A6NJJ6 358 aa19.11■□□□□ 0.65
PRRC2A-210ENST00000483470 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
PRRC2A-210ENST00000483470 LHX8Q68G74 356 aa19.06■□□□□ 0.64
PRRC2A-210ENST00000483470 GABBR2O75899 941 aa19.03■□□□□ 0.64
PRRC2A-210ENST00000483470 SPDYE1Q8NFV5 336 aaPredicted RBP19.03■□□□□ 0.64
PRRC2A-210ENST00000483470 CLEC11AQ9Y240 323 aa18.99■□□□□ 0.63
PRRC2A-210ENST00000483470 FBLN2P98095 1184 aa18.96■□□□□ 0.63
PRRC2A-210ENST00000483470 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
PRRC2A-210ENST00000483470 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
PRRC2A-210ENST00000483470 ZBTB22O15209 634 aa18.76■□□□□ 0.59
PRRC2A-210ENST00000483470 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
PRRC2A-210ENST00000483470 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
PRRC2A-210ENST00000483470 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
PRRC2A-210ENST00000483470 POTEIP0CG38 1075 aa18.61■□□□□ 0.57
PRRC2A-210ENST00000483470 PRR29P0C7W0 189 aa18.58■□□□□ 0.56
PRRC2A-210ENST00000483470 PLSCR2Q9NRY7 297 aa18.55■□□□□ 0.56
PRRC2A-210ENST00000483470 CD44P16070 742 aaKnown RBP18.5■□□□□ 0.55
PRRC2A-210ENST00000483470 CLCN6P51797 869 aa18.5■□□□□ 0.55
PRRC2A-210ENST00000483470 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRRC2A-210ENST00000483470 FARP1Q9Y4F1 1045 aaPredicted RBP18.4■□□□□ 0.54
PRRC2A-210ENST00000483470 DCBLD2Q96PD2 775 aa18.33■□□□□ 0.52
PRRC2A-210ENST00000483470 ZNF579Q8NAF0 562 aaKnown RBP18.21■□□□□ 0.51
PRRC2A-210ENST00000483470 OTUD5Q96G74 571 aa18.1■□□□□ 0.49
PRRC2A-210ENST00000483470 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
PRRC2A-210ENST00000483470 GALR2O43603 387 aaPredicted RBP18.01■□□□□ 0.47
PRRC2A-210ENST00000483470 POTEMA6NI47 508 aa18■□□□□ 0.47
PRRC2A-210ENST00000483470 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
PRRC2A-210ENST00000483470 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
PRRC2A-210ENST00000483470 POTEGQ6S5H5 508 aa17.91■□□□□ 0.46
PRRC2A-210ENST00000483470 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
PRRC2A-210ENST00000483470 PCDH10Q9P2E7 1040 aa17.81■□□□□ 0.44
PRRC2A-210ENST00000483470 ABCC9O60706 1549 aa17.8■□□□□ 0.44
PRRC2A-210ENST00000483470 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
PRRC2A-210ENST00000483470 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
PRRC2A-210ENST00000483470 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
PRRC2A-210ENST00000483470 PHF12Q96QT6 1004 aa17.75■□□□□ 0.43
PRRC2A-210ENST00000483470 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
PRRC2A-210ENST00000483470 METRNQ9UJH8 293 aa17.62■□□□□ 0.41
PRRC2A-210ENST00000483470 ASTLQ6HA08 431 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms