Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PLK5-205ENST00000642079 1969 ntBASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COMMD3-BMI1R4GMX3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 AC131281.2-201ENST00000520478 145 ntBASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 DUX4L19-201ENST00000557448 1267 ntBASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COMMD3-BMI1R4GMX3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3-BMI1R4GMX3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COMMD3-BMI1R4GMX3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.02■□□□□ 0.63
COMMD3-BMI1R4GMX3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COMMD3-BMI1R4GMX3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 AC136469.2-201ENST00000623944 1028 ntBASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 AC005332.7-201ENST00000614046 2005 ntBASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
COMMD3-BMI1R4GMX3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 AC011298.3-201ENST00000615796 283 ntBASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19■□□□□ 0.63
COMMD3-BMI1R4GMX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
COMMD3-BMI1R4GMX3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 SLC47A1P1-202ENST00000449666 945 ntBASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.98■□□□□ 0.63
COMMD3-BMI1R4GMX3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms