Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF19Q9UMS4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 TREX1-205ENST00000625293 1783 ntBASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 MIR3621-201ENST00000580529 85 ntBASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF19Q9UMS4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 AC005224.4-201ENST00000583262 1652 ntBASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 AC133561.4-201ENST00000566112 224 ntBASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 Z82202.1-201ENST00000623446 1880 ntBASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
PRPF19Q9UMS4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRPF19Q9UMS4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 AL691432.2-201ENST00000607222 2038 ntBASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRPF19Q9UMS4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 AC061975.6-201ENST00000579045 1553 ntBASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 AC053503.5-201ENST00000601508 636 ntBASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.32■□□□□ 0.68
PRPF19Q9UMS4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms