Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 KRT125P-201ENST00000546827 989 ntBASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 AC090340.1-201ENST00000620778 4980 ntBASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 NEFHP1-201ENST00000412845 2629 ntBASIC17.84■□□□□ 0.45
COMMD3Q9UBI1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 BX005040.4-201ENST00000637145 1518 ntBASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD3Q9UBI1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.83■□□□□ 0.44
COMMD3Q9UBI1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD3Q9UBI1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD3Q9UBI1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms