Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 AC125437.2-201ENST00000625180 2167 ntBASIC14.94□□□□□ -0.02
VAMP8Q9BV40 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.94□□□□□ -0.02
VAMP8Q9BV40 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 AC126177.7-201ENST00000547904 679 ntBASIC14.93□□□□□ -0.02
VAMP8Q9BV40 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 AC007225.1-201ENST00000566331 1836 ntBASIC14.93□□□□□ -0.02
VAMP8Q9BV40 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VAMP8Q9BV40 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.92□□□□□ -0.02
VAMP8Q9BV40 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 KRT18P10-201ENST00000388836 1287 ntBASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VAMP8Q9BV40 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms