Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 LINC01465-201ENST00000408887 1940 ntBASIC15.37■□□□□ 0.05
HIST1H2BDP58876 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 AC090340.1-201ENST00000620778 4980 ntBASIC15.36■□□□□ 0.05
HIST1H2BDP58876 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2BDP58876 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 DUX4L29-201ENST00000425409 679 ntBASIC15.35■□□□□ 0.05
HIST1H2BDP58876 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 CROCCP3-202ENST00000420820 1947 ntBASIC15.35■□□□□ 0.05
HIST1H2BDP58876 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST1H2BDP58876 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 AC009053.2-201ENST00000563701 2365 ntBASIC15.34■□□□□ 0.05
HIST1H2BDP58876 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 LINC01971-201ENST00000617888 1048 ntBASIC15.34■□□□□ 0.05
HIST1H2BDP58876 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H2BDP58876 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms