Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLNS1AP54105 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 BX842568.3-201ENST00000418104 571 ntBASIC20.13■□□□□ 0.81
CLNS1AP54105 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.13■□□□□ 0.81
CLNS1AP54105 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.13■□□□□ 0.81
CLNS1AP54105 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLNS1AP54105 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CLNS1AP54105 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.12■□□□□ 0.81
CLNS1AP54105 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.12■□□□□ 0.81
CLNS1AP54105 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLNS1AP54105 SMUG1P1-201ENST00000590640 811 ntBASIC20.12■□□□□ 0.81
CLNS1AP54105 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.12■□□□□ 0.81
CLNS1AP54105 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLNS1AP54105 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.12■□□□□ 0.81
CLNS1AP54105 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLNS1AP54105 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CLNS1AP54105 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.11■□□□□ 0.81
CLNS1AP54105 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.11■□□□□ 0.81
CLNS1AP54105 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLNS1AP54105 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.11■□□□□ 0.81
CLNS1AP54105 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.11■□□□□ 0.81
CLNS1AP54105 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.11■□□□□ 0.81
CLNS1AP54105 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLNS1AP54105 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.11■□□□□ 0.81
CLNS1AP54105 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.1■□□□□ 0.81
CLNS1AP54105 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLNS1AP54105 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.1■□□□□ 0.81
CLNS1AP54105 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLNS1AP54105 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLNS1AP54105 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.1■□□□□ 0.81
CLNS1AP54105 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.1■□□□□ 0.81
CLNS1AP54105 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLNS1AP54105 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLNS1AP54105 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.09■□□□□ 0.81
CLNS1AP54105 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLNS1AP54105 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CLNS1AP54105 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLNS1AP54105 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms