Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.33■■■□□ 2.29
CLTCL1P53675 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CLTCL1P53675 ECEL1P3-201ENST00000427961 737 ntBASIC29.33■■■□□ 2.29
CLTCL1P53675 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 AC023632.3-201ENST00000521633 145 ntBASIC29.33■■■□□ 2.29
CLTCL1P53675 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC29.33■■■□□ 2.29
CLTCL1P53675 GRAP-204ENST00000573099 846 ntTSL 3 BASIC29.33■■■□□ 2.29
CLTCL1P53675 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CLTCL1P53675 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.33■■■□□ 2.29
CLTCL1P53675 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CLTCL1P53675 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC29.32■■■□□ 2.28
CLTCL1P53675 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC29.32■■■□□ 2.28
CLTCL1P53675 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC29.32■■■□□ 2.28
CLTCL1P53675 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CLTCL1P53675 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC29.31■■■□□ 2.28
CLTCL1P53675 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC29.31■■■□□ 2.28
CLTCL1P53675 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.31■■■□□ 2.28
CLTCL1P53675 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC29.31■■■□□ 2.28
CLTCL1P53675 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLTCL1P53675 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CLTCL1P53675 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC29.31■■■□□ 2.28
CLTCL1P53675 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CLTCL1P53675 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CLTCL1P53675 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CLTCL1P53675 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.3■■■□□ 2.28
CLTCL1P53675 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC29.3■■■□□ 2.28
CLTCL1P53675 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC29.3■■■□□ 2.28
CLTCL1P53675 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CLTCL1P53675 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC29.3■■■□□ 2.28
CLTCL1P53675 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CLTCL1P53675 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLTCL1P53675 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC29.29■■■□□ 2.28
CLTCL1P53675 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.29■■■□□ 2.28
CLTCL1P53675 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CLTCL1P53675 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC29.29■■■□□ 2.28
CLTCL1P53675 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CLTCL1P53675 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC29.29■■■□□ 2.28
CLTCL1P53675 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.29■■■□□ 2.28
CLTCL1P53675 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC29.29■■■□□ 2.28
CLTCL1P53675 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLTCL1P53675 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC29.28■■■□□ 2.28
CLTCL1P53675 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC29.28■■■□□ 2.28
CLTCL1P53675 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC29.28■■■□□ 2.28
CLTCL1P53675 SNX21-213ENST00000614929 587 ntTSL 5 BASIC29.28■■■□□ 2.28
CLTCL1P53675 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC29.28■■■□□ 2.28
CLTCL1P53675 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC29.28■■■□□ 2.28
CLTCL1P53675 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CLTCL1P53675 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC29.27■■■□□ 2.28
CLTCL1P53675 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CLTCL1P53675 TSPY15P-201ENST00000457163 923 ntBASIC29.27■■■□□ 2.28
CLTCL1P53675 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC29.27■■■□□ 2.28
CLTCL1P53675 AL121829.2-201ENST00000620908 328 ntBASIC29.27■■■□□ 2.28
CLTCL1P53675 AL121906.2-201ENST00000621597 723 ntBASIC29.27■■■□□ 2.28
CLTCL1P53675 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CLTCL1P53675 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms