Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.02■□□□□ 0.48
CHRNB4P30926 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHRNB4P30926 AC124016.1-201ENST00000609552 612 ntBASIC18.02■□□□□ 0.48
CHRNB4P30926 REXO1L12P-201ENST00000622156 912 ntBASIC18.02■□□□□ 0.48
CHRNB4P30926 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHRNB4P30926 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNB4P30926 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHRNB4P30926 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CHRNB4P30926 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHRNB4P30926 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CHRNB4P30926 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHRNB4P30926 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHRNB4P30926 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.01■□□□□ 0.47
CHRNB4P30926 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.01■□□□□ 0.47
CHRNB4P30926 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.01■□□□□ 0.47
CHRNB4P30926 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHRNB4P30926 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 ECEL1P3-201ENST00000427961 737 ntBASIC18.01■□□□□ 0.47
CHRNB4P30926 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.01■□□□□ 0.47
CHRNB4P30926 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.01■□□□□ 0.47
CHRNB4P30926 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.01■□□□□ 0.47
CHRNB4P30926 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.01■□□□□ 0.47
CHRNB4P30926 AL023875.1-201ENST00000640777 796 ntBASIC18.01■□□□□ 0.47
CHRNB4P30926 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNB4P30926 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHRNB4P30926 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18■□□□□ 0.47
CHRNB4P30926 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CHRNB4P30926 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18■□□□□ 0.47
CHRNB4P30926 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CHRNB4P30926 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18■□□□□ 0.47
CHRNB4P30926 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18■□□□□ 0.47
CHRNB4P30926 AL356652.1-201ENST00000615962 565 ntBASIC18■□□□□ 0.47
CHRNB4P30926 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18■□□□□ 0.47
CHRNB4P30926 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNB4P30926 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CHRNB4P30926 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.99■□□□□ 0.47
CHRNB4P30926 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.99■□□□□ 0.47
CHRNB4P30926 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHRNB4P30926 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CHRNB4P30926 LINC01023-201ENST00000606054 436 ntBASIC17.99■□□□□ 0.47
CHRNB4P30926 AC110285.5-201ENST00000611501 352 ntBASIC17.99■□□□□ 0.47
CHRNB4P30926 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 AC006557.6-201ENST00000623071 864 ntBASIC17.99■□□□□ 0.47
CHRNB4P30926 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNB4P30926 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNB4P30926 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CHRNB4P30926 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNB4P30926 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHRNB4P30926 AC211429.1-201ENST00000415277 523 ntBASIC17.98■□□□□ 0.47
CHRNB4P30926 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNB4P30926 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.98■□□□□ 0.47
CHRNB4P30926 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHRNB4P30926 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNB4P30926 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB4P30926 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB4P30926 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNB4P30926 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms