Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL5A2P05997 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL5A2P05997 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC27.02■■□□□ 1.92
COL5A2P05997 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL5A2P05997 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL5A2P05997 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL5A2P05997 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL5A2P05997 UNC93B2-201ENST00000285383 730 ntBASIC27.02■■□□□ 1.92
COL5A2P05997 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC27.02■■□□□ 1.92
COL5A2P05997 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC27.02■■□□□ 1.92
COL5A2P05997 NME3-204ENST00000563498 920 ntTSL 2 BASIC27.02■■□□□ 1.92
COL5A2P05997 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC27.02■■□□□ 1.92
COL5A2P05997 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL5A2P05997 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
COL5A2P05997 TERF1P1-201ENST00000311003 1181 ntBASIC27.01■■□□□ 1.91
COL5A2P05997 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL5A2P05997 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC27.01■■□□□ 1.91
COL5A2P05997 AL031963.3-201ENST00000606441 850 ntBASIC27.01■■□□□ 1.91
COL5A2P05997 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.01■■□□□ 1.91
COL5A2P05997 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.01■■□□□ 1.91
COL5A2P05997 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL5A2P05997 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL5A2P05997 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.01■■□□□ 1.91
COL5A2P05997 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL5A2P05997 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC27■■□□□ 1.91
COL5A2P05997 TPM1-226ENST00000560959 925 ntTSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
COL5A2P05997 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 STK25-205ENST00000405883 1904 ntTSL 2 BASIC27■■□□□ 1.91
COL5A2P05997 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
COL5A2P05997 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC27■■□□□ 1.91
COL5A2P05997 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.99■■□□□ 1.91
COL5A2P05997 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.99■■□□□ 1.91
COL5A2P05997 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
COL5A2P05997 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.99■■□□□ 1.91
COL5A2P05997 AL390955.1-201ENST00000428694 934 ntBASIC26.99■■□□□ 1.91
COL5A2P05997 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
COL5A2P05997 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.99■■□□□ 1.91
COL5A2P05997 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL5A2P05997 AC073508.3-201ENST00000619697 1419 ntBASIC26.98■■□□□ 1.91
COL5A2P05997 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.98■■□□□ 1.91
COL5A2P05997 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
COL5A2P05997 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 MIR1238-201ENST00000408483 83 ntBASIC26.98■■□□□ 1.91
COL5A2P05997 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
COL5A2P05997 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.98■■□□□ 1.91
COL5A2P05997 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL5A2P05997 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.97■■□□□ 1.91
COL5A2P05997 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL5A2P05997 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.97■■□□□ 1.91
COL5A2P05997 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.97■■□□□ 1.91
COL5A2P05997 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC26.97■■□□□ 1.91
COL5A2P05997 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.97■■□□□ 1.91
COL5A2P05997 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL5A2P05997 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC26.97■■□□□ 1.91
COL5A2P05997 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
COL5A2P05997 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
COL5A2P05997 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
COL5A2P05997 CYP2D8P-201ENST00000433633 1490 ntBASIC26.97■■□□□ 1.91
COL5A2P05997 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL5A2P05997 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL5A2P05997 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL5A2P05997 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
COL5A2P05997 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL5A2P05997 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.96■■□□□ 1.91
COL5A2P05997 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.96■■□□□ 1.91
COL5A2P05997 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL5A2P05997 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL5A2P05997 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL5A2P05997 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
COL5A2P05997 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.95■■□□□ 1.91
COL5A2P05997 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL5A2P05997 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.95■■□□□ 1.9
COL5A2P05997 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL5A2P05997 LINC01568-207ENST00000641790 1380 ntBASIC26.95■■□□□ 1.9
COL5A2P05997 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.95■■□□□ 1.9
COL5A2P05997 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL5A2P05997 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
COL5A2P05997 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL5A2P05997 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.94■■□□□ 1.9
COL5A2P05997 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms