Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.17■■□□□ 1.14
TIMP1P01033 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TIMP1P01033 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TIMP1P01033 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.17■■□□□ 1.14
TIMP1P01033 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TIMP1P01033 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.17■■□□□ 1.14
TIMP1P01033 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TIMP1P01033 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TIMP1P01033 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.16■■□□□ 1.14
TIMP1P01033 FITM1-202ENST00000559294 800 ntBASIC22.16■■□□□ 1.14
TIMP1P01033 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.16■■□□□ 1.14
TIMP1P01033 NTF6B-201ENST00000591913 560 ntBASIC22.16■■□□□ 1.14
TIMP1P01033 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.16■■□□□ 1.14
TIMP1P01033 AC010947.1-201ENST00000623454 693 ntBASIC22.16■■□□□ 1.14
TIMP1P01033 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.16■■□□□ 1.14
TIMP1P01033 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TIMP1P01033 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
TIMP1P01033 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP1P01033 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP1P01033 DUX4L26-201ENST00000489078 1255 ntBASIC22.15■■□□□ 1.14
TIMP1P01033 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.15■■□□□ 1.14
TIMP1P01033 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.15■■□□□ 1.14
TIMP1P01033 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP1P01033 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.15■■□□□ 1.14
TIMP1P01033 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP1P01033 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TIMP1P01033 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TIMP1P01033 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TIMP1P01033 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TIMP1P01033 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP1P01033 AL390955.1-201ENST00000428694 934 ntBASIC22.14■■□□□ 1.13
TIMP1P01033 SLC25A3P1-201ENST00000443844 931 ntBASIC22.14■■□□□ 1.13
TIMP1P01033 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.14■■□□□ 1.13
TIMP1P01033 AC116562.2-201ENST00000507042 360 ntBASIC22.14■■□□□ 1.13
TIMP1P01033 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.14■■□□□ 1.13
TIMP1P01033 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.14■■□□□ 1.13
TIMP1P01033 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.14■■□□□ 1.13
TIMP1P01033 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TIMP1P01033 AL121906.2-201ENST00000621597 723 ntBASIC22.14■■□□□ 1.13
TIMP1P01033 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.14■■□□□ 1.13
TIMP1P01033 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.14■■□□□ 1.13
TIMP1P01033 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TIMP1P01033 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
TIMP1P01033 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.13■■□□□ 1.13
TIMP1P01033 AC104076.2-201ENST00000448912 469 ntBASIC22.13■■□□□ 1.13
TIMP1P01033 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.13■■□□□ 1.13
TIMP1P01033 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TIMP1P01033 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.12■■□□□ 1.13
TIMP1P01033 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.12■■□□□ 1.13
TIMP1P01033 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TIMP1P01033 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.12■■□□□ 1.13
TIMP1P01033 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.12■■□□□ 1.13
TIMP1P01033 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
TIMP1P01033 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.12■■□□□ 1.13
TIMP1P01033 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.12■■□□□ 1.13
TIMP1P01033 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
TIMP1P01033 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TIMP1P01033 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.12■■□□□ 1.13
TIMP1P01033 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TIMP1P01033 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.11■■□□□ 1.13
TIMP1P01033 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.11■■□□□ 1.13
TIMP1P01033 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.11■■□□□ 1.13
TIMP1P01033 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.11■■□□□ 1.13
TIMP1P01033 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.11■■□□□ 1.13
TIMP1P01033 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.11■■□□□ 1.13
TIMP1P01033 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.11■■□□□ 1.13
TIMP1P01033 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.11■■□□□ 1.13
TIMP1P01033 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.11■■□□□ 1.13
TIMP1P01033 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
TIMP1P01033 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.11■■□□□ 1.13
TIMP1P01033 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TIMP1P01033 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
TIMP1P01033 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.1■■□□□ 1.13
TIMP1P01033 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TIMP1P01033 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
TIMP1P01033 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TIMP1P01033 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.1■■□□□ 1.13
TIMP1P01033 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.1■■□□□ 1.13
TIMP1P01033 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms