Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFT2D2O95562 SERBP1P1-201ENST00000396021 1160 ntBASIC16.83■□□□□ 0.28
SFT2D2O95562 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.83■□□□□ 0.28
SFT2D2O95562 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.83■□□□□ 0.28
SFT2D2O95562 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFT2D2O95562 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SFT2D2O95562 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.83■□□□□ 0.28
SFT2D2O95562 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFT2D2O95562 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.83■□□□□ 0.28
SFT2D2O95562 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.83■□□□□ 0.28
SFT2D2O95562 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFT2D2O95562 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFT2D2O95562 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
SFT2D2O95562 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SFT2D2O95562 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SFT2D2O95562 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
SFT2D2O95562 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.82■□□□□ 0.28
SFT2D2O95562 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 AC093484.2-201ENST00000580996 2166 ntBASIC16.82■□□□□ 0.28
SFT2D2O95562 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SFT2D2O95562 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SFT2D2O95562 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFT2D2O95562 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SFT2D2O95562 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.81■□□□□ 0.28
SFT2D2O95562 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 KRT16P3-201ENST00000439127 1283 ntBASIC16.81■□□□□ 0.28
SFT2D2O95562 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.81■□□□□ 0.28
SFT2D2O95562 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
SFT2D2O95562 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.81■□□□□ 0.28
SFT2D2O95562 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SFT2D2O95562 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SFT2D2O95562 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
SFT2D2O95562 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.8■□□□□ 0.28
SFT2D2O95562 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SFT2D2O95562 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SFT2D2O95562 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SFT2D2O95562 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.8■□□□□ 0.28
SFT2D2O95562 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SFT2D2O95562 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.8■□□□□ 0.28
SFT2D2O95562 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SFT2D2O95562 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SFT2D2O95562 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SFT2D2O95562 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SFT2D2O95562 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SFT2D2O95562 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SFT2D2O95562 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.79■□□□□ 0.28
SFT2D2O95562 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.79■□□□□ 0.28
SFT2D2O95562 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.79■□□□□ 0.28
SFT2D2O95562 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SFT2D2O95562 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.79■□□□□ 0.28
SFT2D2O95562 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.79■□□□□ 0.28
SFT2D2O95562 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SFT2D2O95562 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms