Protein–RNA interactions for Protein: Q9UJ68

MSRA, Mitochondrial peptide methionine sulfoxide reductase, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRAQ9UJ68 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 AL390955.1-201ENST00000428694 934 ntBASIC21.84■■□□□ 1.09
MSRAQ9UJ68 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 AC010947.1-201ENST00000623454 693 ntBASIC21.84■■□□□ 1.09
MSRAQ9UJ68 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 AC026471.6-201ENST00000622954 1905 ntBASIC21.84■■□□□ 1.09
MSRAQ9UJ68 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.84■■□□□ 1.09
MSRAQ9UJ68 AC093323.1-202ENST00000635031 2045 ntBASIC21.84■■□□□ 1.09
MSRAQ9UJ68 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 LIN28AP1-201ENST00000429574 405 ntBASIC21.83■■□□□ 1.09
MSRAQ9UJ68 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.83■■□□□ 1.09
MSRAQ9UJ68 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSRAQ9UJ68 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.83■■□□□ 1.08
MSRAQ9UJ68 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSRAQ9UJ68 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.83■■□□□ 1.08
MSRAQ9UJ68 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSRAQ9UJ68 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 ATP5G1P1-201ENST00000448724 379 ntBASIC21.81■■□□□ 1.08
MSRAQ9UJ68 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 WWOX-216ENST00000569818 525 ntBASIC21.81■■□□□ 1.08
MSRAQ9UJ68 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSRAQ9UJ68 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
MSRAQ9UJ68 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 UPK3BP1-201ENST00000428678 509 ntBASIC21.79■■□□□ 1.08
MSRAQ9UJ68 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.79■■□□□ 1.08
MSRAQ9UJ68 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms