Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.27■■□□□ 1
HCFC1R1Q9NWW0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
HCFC1R1Q9NWW0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HCFC1R1Q9NWW0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
HCFC1R1Q9NWW0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HCFC1R1Q9NWW0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 AC110285.5-201ENST00000611501 352 ntBASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HCFC1R1Q9NWW0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 AL049637.2-201ENST00000641778 930 ntBASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 AC011484.1-201ENST00000377652 1995 ntBASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
HCFC1R1Q9NWW0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.24■□□□□ 0.99
HCFC1R1Q9NWW0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 TSPY15P-201ENST00000457163 923 ntBASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1R1Q9NWW0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 BX088651.1-201ENST00000540551 451 ntBASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1R1Q9NWW0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.21■□□□□ 0.99
HCFC1R1Q9NWW0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms