Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 AL162412.1-201ENST00000567129 965 ntBASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 AC142086.2-201ENST00000569753 217 ntBASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.02■□□□□ 0.31
PCGF1Q9BSM1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AC007952.6-201ENST00000573168 2673 ntBASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AC003957.1-201ENST00000625108 2673 ntBASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 BX276092.2-201ENST00000417668 665 ntBASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AC091799.1-201ENST00000422823 811 ntBASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 RARRES2P4-201ENST00000514074 484 ntBASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCGF1Q9BSM1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 MIPEPP3-201ENST00000412105 444 ntBASIC17■□□□□ 0.31
PCGF1Q9BSM1 AL512625.2-201ENST00000417533 625 ntBASIC17■□□□□ 0.31
PCGF1Q9BSM1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 MIR4758-201ENST00000577688 71 ntBASIC17■□□□□ 0.31
PCGF1Q9BSM1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCGF1Q9BSM1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCGF1Q9BSM1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 AC069152.1-201ENST00000438030 544 ntBASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 AC133041.1-202ENST00000642053 222 ntBASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 AL049796.1-201ENST00000565336 1766 ntBASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCGF1Q9BSM1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 AC098934.4-201ENST00000564127 592 ntBASIC16.98■□□□□ 0.31
PCGF1Q9BSM1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms