Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC44A1Q8WWI5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC44A1Q8WWI5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC44A1Q8WWI5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SLC44A1Q8WWI5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC44A1Q8WWI5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 AC116562.4-201ENST00000641316 2276 ntBASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC44A1Q8WWI5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 KRT8P36-201ENST00000489121 1440 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L2-201ENST00000561772 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L6-201ENST00000626483 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L1-201ENST00000627662 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L8-201ENST00000629013 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L3-201ENST00000630187 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L7-201ENST00000630678 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 DUX4L5-201ENST00000630834 1275 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 AL158211.5-201ENST00000623583 2518 ntBASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC44A1Q8WWI5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC44A1Q8WWI5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC44A1Q8WWI5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms