Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 AC026471.1-201ENST00000564629 3026 ntBASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SMIM4Q8WVI0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 NEFHP1-201ENST00000412845 2629 ntBASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMIM4Q8WVI0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 LETM1P2-201ENST00000597330 2178 ntBASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 SMUG1P1-201ENST00000590640 811 ntBASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM4Q8WVI0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 AC092171.4-201ENST00000609130 632 ntBASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 TREX1-205ENST00000625293 1783 ntBASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 Z82202.1-201ENST00000623446 1880 ntBASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM4Q8WVI0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM4Q8WVI0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms