Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 LINC00565-201ENST00000562710 2331 ntBASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 AC026366.1-201ENST00000488803 879 ntBASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 C2orf69P4-201ENST00000565394 541 ntBASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 AL049796.1-201ENST00000565336 1766 ntBASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.09■□□□□ 0.49
CNEP1R1Q8N9A8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNEP1R1Q8N9A8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 PNMA6B-201ENST00000538162 1200 ntBASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CNEP1R1Q8N9A8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNEP1R1Q8N9A8 AC121338.2-201ENST00000622535 1744 ntBASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 PRORSD1P-201ENST00000295112 541 ntBASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 AC008687.6-201ENST00000596318 630 ntBASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CNEP1R1Q8N9A8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNEP1R1Q8N9A8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNEP1R1Q8N9A8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNEP1R1Q8N9A8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms