Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 AC087289.5-201ENST00000586076 3175 ntBASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CRLF3Q8IUI8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 AC123595.1-201ENST00000440769 1046 ntBASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRLF3Q8IUI8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 SMG8-203ENST00000578922 2178 ntBASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRLF3Q8IUI8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.24■□□□□ 0.83
CRLF3Q8IUI8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L2-201ENST00000561772 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L6-201ENST00000626483 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L1-201ENST00000627662 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L8-201ENST00000629013 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L3-201ENST00000630187 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L7-201ENST00000630678 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DUX4L5-201ENST00000630834 1275 ntBASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRLF3Q8IUI8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms