Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 GCSHP5-201ENST00000443090 522 ntBASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC093827.2-201ENST00000512654 315 ntBASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AL356652.1-201ENST00000615962 565 ntBASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB11FIP1Q6WKZ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC011484.1-201ENST00000377652 1995 ntBASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SOX15-203ENST00000570788 1093 ntBASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB11FIP1Q6WKZ4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB11FIP1Q6WKZ4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RAB11FIP1Q6WKZ4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RAB11FIP1Q6WKZ4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 KRT17P3-201ENST00000420566 1262 ntBASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB11FIP1Q6WKZ4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB11FIP1Q6WKZ4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms