Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC10.95□□□□□ -0.66
SEC61BP60468 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 RER1-204ENST00000378518 522 ntTSL 3 BASIC10.95□□□□□ -0.66
SEC61BP60468 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
SEC61BP60468 AC239809.2-201ENST00000415381 517 ntBASIC10.95□□□□□ -0.66
SEC61BP60468 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.95□□□□□ -0.66
SEC61BP60468 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC10.95□□□□□ -0.66
SEC61BP60468 MIR4497-201ENST00000583208 89 ntBASIC10.95□□□□□ -0.66
SEC61BP60468 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC10.95□□□□□ -0.66
SEC61BP60468 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SEC61BP60468 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SEC61BP60468 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC10.94□□□□□ -0.66
SEC61BP60468 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SEC61BP60468 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SEC61BP60468 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.94□□□□□ -0.66
SEC61BP60468 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
SEC61BP60468 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SEC61BP60468 ISG20-202ENST00000379224 540 ntTSL 3 BASIC10.94□□□□□ -0.66
SEC61BP60468 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 SLC29A4P2-201ENST00000504749 1089 ntBASIC10.94□□□□□ -0.66
SEC61BP60468 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC10.94□□□□□ -0.66
SEC61BP60468 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC10.94□□□□□ -0.66
SEC61BP60468 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.94□□□□□ -0.66
SEC61BP60468 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC10.94□□□□□ -0.66
SEC61BP60468 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC10.94□□□□□ -0.66
SEC61BP60468 AC005829.2-201ENST00000571422 1056 ntBASIC10.94□□□□□ -0.66
SEC61BP60468 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC10.94□□□□□ -0.66
SEC61BP60468 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SEC61BP60468 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.93□□□□□ -0.66
SEC61BP60468 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC10.93□□□□□ -0.66
SEC61BP60468 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC10.93□□□□□ -0.66
SEC61BP60468 AC012618.2-201ENST00000428058 849 ntBASIC10.93□□□□□ -0.66
SEC61BP60468 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC10.93□□□□□ -0.66
SEC61BP60468 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC10.93□□□□□ -0.66
SEC61BP60468 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
SEC61BP60468 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SEC61BP60468 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC10.93□□□□□ -0.66
SEC61BP60468 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms