Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 AL031848.2-201ENST00000607670 837 ntBASIC17.47■□□□□ 0.39
AP3S2P59780 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AP3S2P59780 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP3S2P59780 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 AC005332.7-201ENST00000614046 2005 ntBASIC17.47■□□□□ 0.39
AP3S2P59780 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP3S2P59780 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.46■□□□□ 0.39
AP3S2P59780 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.46■□□□□ 0.39
AP3S2P59780 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP3S2P59780 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP3S2P59780 AC125437.2-201ENST00000625180 2167 ntBASIC17.46■□□□□ 0.39
AP3S2P59780 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
AP3S2P59780 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.46■□□□□ 0.39
AP3S2P59780 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3S2P59780 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
AP3S2P59780 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3S2P59780 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AP3S2P59780 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
AP3S2P59780 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3S2P59780 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3S2P59780 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
AP3S2P59780 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S2P59780 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.44■□□□□ 0.38
AP3S2P59780 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3S2P59780 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 TSPY13P-201ENST00000338964 914 ntBASIC17.44■□□□□ 0.38
AP3S2P59780 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.44■□□□□ 0.38
AP3S2P59780 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 AC103834.1-201ENST00000520383 144 ntBASIC17.44■□□□□ 0.38
AP3S2P59780 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3S2P59780 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP3S2P59780 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3S2P59780 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
AP3S2P59780 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3S2P59780 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S2P59780 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3S2P59780 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AP3S2P59780 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3S2P59780 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP3S2P59780 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
AP3S2P59780 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms