Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1EP28566 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1EP28566 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1EP28566 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1EP28566 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1EP28566 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HTR1EP28566 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1EP28566 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.47■□□□□ 0.71
HTR1EP28566 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1EP28566 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1EP28566 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.47■□□□□ 0.71
HTR1EP28566 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1EP28566 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.47■□□□□ 0.71
HTR1EP28566 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HTR1EP28566 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
HTR1EP28566 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.46■□□□□ 0.71
HTR1EP28566 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.46■□□□□ 0.71
HTR1EP28566 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.46■□□□□ 0.71
HTR1EP28566 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.46■□□□□ 0.71
HTR1EP28566 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTR1EP28566 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTR1EP28566 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HTR1EP28566 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.45■□□□□ 0.7
HTR1EP28566 CROCCP5-201ENST00000436658 830 ntBASIC19.45■□□□□ 0.7
HTR1EP28566 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.45■□□□□ 0.7
HTR1EP28566 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.45■□□□□ 0.7
HTR1EP28566 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
HTR1EP28566 AP004607.4-201ENST00000530158 1459 ntBASIC19.45■□□□□ 0.7
HTR1EP28566 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
HTR1EP28566 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTR1EP28566 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HTR1EP28566 AC004854.2-201ENST00000608450 1441 ntBASIC19.44■□□□□ 0.7
HTR1EP28566 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HTR1EP28566 RNF165-205ENST00000588679 2904 ntBASIC19.44■□□□□ 0.7
HTR1EP28566 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.44■□□□□ 0.7
HTR1EP28566 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HTR1EP28566 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
HTR1EP28566 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
HTR1EP28566 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HTR1EP28566 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTR1EP28566 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HTR1EP28566 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR1EP28566 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR1EP28566 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 TPRG1LP1-201ENST00000598702 760 ntBASIC19.43■□□□□ 0.7
HTR1EP28566 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HTR1EP28566 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.43■□□□□ 0.7
HTR1EP28566 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTR1EP28566 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
HTR1EP28566 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
HTR1EP28566 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms