Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL4P13236 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL4P13236 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL4P13236 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CCL4P13236 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
CCL4P13236 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 AC211429.1-201ENST00000415277 523 ntBASIC19.32■□□□□ 0.68
CCL4P13236 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL4P13236 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL4P13236 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL4P13236 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL4P13236 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCL4P13236 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 AC011484.1-201ENST00000377652 1995 ntBASIC19.32■□□□□ 0.68
CCL4P13236 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL4P13236 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL4P13236 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL4P13236 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL4P13236 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CCL4P13236 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL4P13236 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL4P13236 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCL4P13236 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCL4P13236 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL4P13236 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL4P13236 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL4P13236 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCL4P13236 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.3■□□□□ 0.68
CCL4P13236 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCL4P13236 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.3■□□□□ 0.68
CCL4P13236 AL049637.2-201ENST00000641778 930 ntBASIC19.3■□□□□ 0.68
CCL4P13236 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL4P13236 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL4P13236 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL4P13236 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.29■□□□□ 0.68
CCL4P13236 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL4P13236 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL4P13236 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.29■□□□□ 0.68
CCL4P13236 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.29■□□□□ 0.68
CCL4P13236 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.29■□□□□ 0.68
CCL4P13236 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL4P13236 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.29■□□□□ 0.68
CCL4P13236 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCL4P13236 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL4P13236 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL4P13236 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL4P13236 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCL4P13236 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 BX088651.1-201ENST00000540551 451 ntBASIC19.28■□□□□ 0.68
CCL4P13236 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL4P13236 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCL4P13236 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL4P13236 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL4P13236 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL4P13236 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms