Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AF186192.3-201ENST00000583427 947 ntBASIC19.21■□□□□ 0.67
RRP8O43159 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.21■□□□□ 0.67
RRP8O43159 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RRP8O43159 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RRP8O43159 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.2■□□□□ 0.66
RRP8O43159 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RRP8O43159 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RRP8O43159 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.2■□□□□ 0.66
RRP8O43159 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.2■□□□□ 0.66
RRP8O43159 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.2■□□□□ 0.66
RRP8O43159 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RRP8O43159 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RRP8O43159 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
RRP8O43159 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.19■□□□□ 0.66
RRP8O43159 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RRP8O43159 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
RRP8O43159 C11orf96-202ENST00000528572 1834 ntBASIC19.19■□□□□ 0.66
RRP8O43159 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RRP8O43159 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.19■□□□□ 0.66
RRP8O43159 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.19■□□□□ 0.66
RRP8O43159 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
RRP8O43159 AC116050.2-201ENST00000612102 1779 ntBASIC19.19■□□□□ 0.66
RRP8O43159 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RRP8O43159 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 AC113347.1-201ENST00000413321 391 ntBASIC19.18■□□□□ 0.66
RRP8O43159 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.18■□□□□ 0.66
RRP8O43159 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.18■□□□□ 0.66
RRP8O43159 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
RRP8O43159 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.18■□□□□ 0.66
RRP8O43159 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
RRP8O43159 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 HTR7P1-201ENST00000538670 1336 ntBASIC19.18■□□□□ 0.66
RRP8O43159 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
RRP8O43159 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RRP8O43159 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.17■□□□□ 0.66
RRP8O43159 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 UNC93B2-201ENST00000285383 730 ntBASIC19.17■□□□□ 0.66
RRP8O43159 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 AL137013.1-201ENST00000432946 1228 ntBASIC19.17■□□□□ 0.66
RRP8O43159 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.17■□□□□ 0.66
RRP8O43159 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.17■□□□□ 0.66
RRP8O43159 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RRP8O43159 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.17■□□□□ 0.66
RRP8O43159 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RRP8O43159 LINC01568-207ENST00000641790 1380 ntBASIC19.17■□□□□ 0.66
RRP8O43159 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RRP8O43159 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.16■□□□□ 0.66
RRP8O43159 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RRP8O43159 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
RRP8O43159 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms